The zebrafish is a widely used model organism for biomedical research due to its ease of maintenance, external fertilization of embryos, rapid embryonic development, and availability of established genetic tools. One notable advantage of using zebrafish is the transparency of the embryos, which enables high-resolution imaging of specific cells, tissues, and structures through the use of transgenic and knock-in lines. However, as the embryo develops, multiple layers of tissue wrap around the lipid-enriched yolk, which can create a challenge to image tissues located deep within the embryo. While various methods are available, such as two-photon imaging, cryosectioning, vibratome sectioning, and micro-surgery, each of these has limitations. In this study, we present a novel deyolking method that allows for high-quality imaging of tissues that are obscured by other tissues and the yolk. Embryos are lightly fixed in 1% PFA to remove the yolk without damaging embryonic tissues and are then refixed in 4% PFA and mounted on custom-made bridged slides. This method offers a simple way to prepare imaging samples that can be subjected to further preparation, such as immunostaining. Furthermore, the bridged slides described in this study can be used for imaging tissue and organ preparations from various model organisms.
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http://dx.doi.org/10.1242/bio.060048 | DOI Listing |
J Pediatr Orthop
January 2025
Division of Orthopaedic Surgery, Rady Children's Hospital-San Diego, San Diego, CA.
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View Article and Find Full Text PDFGigascience
January 2025
School of Life, Health & Chemical Sciences, The Open University, Milton Keynes, Buckinghamshire, MK7 6AA, UK.
Background: Bioinformatics is fundamental to biomedical sciences, but its mastery presents a steep learning curve for bench biologists and clinicians. Learning to code while analyzing data is difficult. The curve may be flattened by separating these two aspects and providing intermediate steps for budding bioinformaticians.
View Article and Find Full Text PDFEntropy (Basel)
December 2024
Center for Eudaimonia and Human Flourishing, Linacre College, University of Oxford, Oxford OX3 9BX, UK.
Entropy management, central to the Free Energy Principle, requires a process that temporarily shifts brain activity toward states of lower or higher entropy. Metastable synchronization is a process by which a system achieves entropy fluctuations by intermittently transitioning between states of collective order and disorder. Previous work has shown that collective oscillations, similar to those recorded from the brain, emerge spontaneously from weakly stable synchronization in critically coupled oscillator systems.
View Article and Find Full Text PDFJ Colloid Interface Sci
December 2024
Department of Mechanical Engineering (Robotics), Guangdong Technion - Israel Institute of Technology, Shantou, Guangdong 515063, China.
Hypothesis: Current models for receding contact angles of Cassie-Baxter state droplets on textured hydrophobic substrates are applicable only to a specific structural type, e.g., pillar (above which a droplet has isolated contact line and continuous liquid-vapor interface) or pore (continuous contact line and isolated liquid-vapor interface), signifying a lack of universality.
View Article and Find Full Text PDFAnn Thorac Surg
December 2024
Paediatric Cardiothoracic and Tracheal Surgery, Great Ormond Street Hospital for Children NHS Foundation Trust, London, UK.
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