Flow-cytometric cell sorting coupled with UV mutagenesis for improving pectin lyase expression.

Front Bioeng Biotechnol

State Key Laboratory of Biobased Material and Green Papermaking (LBMP), Qilu University of Technology, Jinan, Shandong, China.

Published: August 2023

Alkaline pectin lyase is an important enzyme with a wide range of applications in industrial production, It has been widely used in many important fields such as fruit juice processing and extraction, the dyeing and processing of cotton and linen textiles, degumming plant fibers, environmental industrial wastewater treatment, and pulp and paper production. PGLA-rep4 was previously generated as a modified alkaline pectin lyase with high specific activity at pH 11.0°C and 70°C. However, the pre-constructed high-activity pectin lyase expression strains are still difficult to apply in industrial production due to their limited enzymatic activity. We hope to solve these problems by combining modern breeding techniques with high-throughput equipment to rapidly screen alkaline pectin lyase with higher enzymatic activity and lower cost. We fused the genes encoding PGLA-rep4 and fluorescent protein using a flexible linker peptide and ligated them into a temperaturesensitive plasmid, pKD46. The constructed screening plasmid pKD46-PGLA-rep4- was then transformed into an expression host and screened via flow-cytometric cell sorting coupled with UV mutagenesis. Following mutagenesis, primary screening, and secondary screening, the high-expression strain, named BL21/1G3, was obtained. The screening plasmid pKD46-PGLA-rep4- was eliminated, and the original expression plasmid pET28a-PGLA-rep4 was then retransformed into the mutant strains. After induction and fermentation, pectin lyase activity in BL21/1G3 was significantly increased (1.37-fold relative to that in the parental BL21/PGLA-rep4 strain, < 0.001), and the highest activity was 230, 240 U/mL at 144 h. Genome sequencing revealed that genes encoding ribonuclease E (RNase E) and diadenosine tetraphosphatase (ApaH) of BL21/1G3 were mutated compared to the sequence in the original BL21 (DE3) strain, which could be associated with increased enzyme expression. Our work provides an effective method for the construction of strains expressing pectin lyase at high levels.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10502208PMC
http://dx.doi.org/10.3389/fbioe.2023.1251342DOI Listing

Publication Analysis

Top Keywords

pectin lyase
28
alkaline pectin
12
flow-cytometric cell
8
cell sorting
8
sorting coupled
8
coupled mutagenesis
8
lyase expression
8
industrial production
8
lyase high
8
enzymatic activity
8

Similar Publications

The recovery of polysaccharides (PS) from red grape marc and white grape pomace by enzymatic degradation of their cell walls is an interesting green extraction technique that preserves the structure and bioactivity of PS. The type and dose of enzyme, and the liquid/solid (L/S) ratio in PS extraction were studied using four commercial enzymes. Four different doses per enzyme were used, with tartaric acid as solvent and L/S ratios of 1.

View Article and Find Full Text PDF

The antifungal targets of the new fungicide -(naphthalen-1-yl)-phenazine-1-carboxamide (NNPCN) are still incomplete, limiting its application. To identify potential new targets of NNPCN and facilitate target hunting, a suite of techniques was employed to conduct experiments on . Nine potential targets were identified, exhibiting strong binding affinity to NNPCN, as indicated by binding free energies below -100.

View Article and Find Full Text PDF

Activation of three targets by a TAL effector confers susceptibility to bacterial blight of cotton.

Nat Commun

January 2025

Department of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI, 48109, USA.

Bacterial transcription activator-like effectors (TALEs) promote pathogenicity by activating host susceptibility (S) genes. To understand the pathogenicity and host adaptation of Xanthomonas citri pv. malvacearum (Xcm), we assemble the genome and the TALE repertoire of three recent Xcm Texas isolates.

View Article and Find Full Text PDF

Enzymatic treatment shapes in vitro digestion pattern of phenolic compounds in mulberry juice.

Food Chem

March 2025

Department of Food Science and Engineering, Institute of Food Safety and Nutrition, Guangdong Engineering Technology Center of Food Safety Molecular Rapid Detection, College of Life Science and Technology, Jinan University, Guangzhou 510632, China. Electronic address:

The health benefits of mulberry fruit are closely associated with its phenolic compounds. However, the effects of enzymatic treatments on the digestion patterns of these compounds in mulberry juice remain largely unknown. This study investigated the impact of pectinase (PE), pectin lyase (PL), and cellulase (CE) on the release of phenolic compounds in whole mulberry juice.

View Article and Find Full Text PDF

Hydrological transport and endosperm weakening mechanisms during dormancy release in Tilia henryana seeds.

J Plant Physiol

January 2025

College of Forestry, Nanjing Forestry University, 159 Longpan Road, Xuanwu District, Nanjing, Jiangsu, 210037, PR China; Co-innovation Center for Sustainable Forestry in Southern China, Southern Tree Inspection Center National Forestry Administration, 159 Longpan Road, Xuanwu District, Nanjing, Jiangsu, 210037, PR China. Electronic address:

Seed germination is a pivotal stage in the plant life cycle, with endosperm weakening and radicle elongation serving as crucial prerequisites for successful endospermic seed germination. Tilia henryana seeds exhibit deep dormancy, necessitating a period of 2-3 years to germinate in a natural environment, and the germination rate is extremely low. This study employed morphological and physiological approaches to dynamically analyzing the hydrological mechanism and the endosperm weakening process during the dormancy release of T.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!