Introduction: This study examines the state and trait effects of short-term mindfulness-based stress reduction (MBSR) training using convolutional neural networks (CNN) based deep learning methods and traditional machine learning methods, including shallow and deep ConvNets as well as support vector machine (SVM) with features extracted from common spatial pattern (CSP) and filter bank CSP (FBCSP).
Methods: We investigated the electroencephalogram (EEG) measurements of 11 novice MBSR practitioners (6 males, 5 females; mean age 35.7 years; 7 Asians and 4 Caucasians) during resting and meditation at early and late training stages. The classifiers are trained and evaluated using inter-subject, mix-subject, intra-subject, and subject-transfer classification strategies, each according to a specific application scenario.
Results: For MBSR state effect recognition, trait effect recognition using meditation EEG, and trait effect recognition using resting EEG, from shallow ConvNet classifier we get mix-subject/intra-subject classification accuracies superior to related previous studies for both novice and expert meditators with a variety of meditation types including yoga, Tibetan, and mindfulness, whereas from FBSCP + SVM classifier we get inter-subject classification accuracies of 68.50, 85.00, and 78.96%, respectively.
Conclusion: Deep learning is superior for state effect recognition of novice meditators and slightly inferior but still comparable for both state and trait effects recognition of expert meditators when compared to the literatures. This study supports previous findings that short-term meditation training has EEG-recognizable state and trait effects.
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http://dx.doi.org/10.3389/fnhum.2023.1033420 | DOI Listing |
Theor Appl Genet
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CSIRO Agriculture and Food, Canberra, ACT, 2601, Australia.
Zebularine-treated wheat uncovered a phenotype with characteristics of an epigenetically regulated trait, but major chromosomal aberrations, not DNA methylation changes, are the cause, making zebularine unsuitable for epigenetic breeding. Breeding to identify disease-resistant and climate-tolerant high-yielding wheats has led to yield increases over many years, but new hardy, higher yielding varieties are still needed to improve food security in the face of climate change. Traditional breeding to develop new cultivars of wheat is a lengthy process taking more than seven years from the initial cross to cultivar release.
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January 2025
College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, Heilongjiang, China.
Inflammatory bowel disease (IBD) with the two predominant endophenotypes-Crohn's disease (CD) and ulcerative colitis (UC)-represents a group of chronic gastrointestinal inflammatory conditions. Since most genetic associations with IBD are often limited to independent subtypes, we reported a genome-wide association study (GWAS) cross-trait analysis combined with CD and UC to enhance statistical power. Initially, we detected 256 association signals at 54 genomic susceptibility loci and further characterized the functionality of variants within these regions.
View Article and Find Full Text PDFPlant Cell Environ
January 2025
State Key Laboratory of Tree Genetics and Breeding, Research Institute of Forestry, Chinese Academy of Forestry, Beijing, China.
Growth heterosis is crucial for Populus deltoides breeding, a key industrial-timber and ecological-construction tree species in temperate regions. However, the molecular mechanisms underlying carbon (C)-nitrogen (N) metabolism coordination in regulating growth heterosis remain unclear. Herein high-hybrids of P.
View Article and Find Full Text PDFBMC Plant Biol
January 2025
Plants for Human Health Institute, North Carolina State University, Kannapolis, NC, 28081, USA.
Background: Fruit quality traits, including taste, flavor, texture, and shelf-life, have emerged as important breeding priorities in blueberry (Vaccinium corymbosum). Organic acids and sugars play crucial roles in the perception of blueberry taste/flavor, where low and high consumer liking are correlated with high organic acids and high sugars, respectively. Blueberry texture and appearance are also critical for shelf-life quality and consumers' willingness-to-pay.
View Article and Find Full Text PDFSci Rep
January 2025
Center on Aging and Health, Johns Hopkins University, Baltimore, MD, USA.
Although prior studies have examined associations of personality traits with sleep, most have investigated self-reported sleep, been cross-sectional, and focused on younger and middle-aged adults. We investigated associations of personality with actigraphic sleep parameters and changes in sleep in 398 cognitively normal adults aged 40-95 years (M ± SD = 70.1 ± 12.
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