AI Article Synopsis

  • Bacteria exhibit varying growth rates on different nutrients due to factors like 'nutrient quality', but the reasons behind this variability are not fully understood.
  • Researchers found that while nutrient quality impacts the investment in specific transporters and enzymes, it is not the main factor limiting growth rate.
  • By reengineering metabolic pathways, they transformed mannose from a poor nutrient to an effective one, demonstrating that growth can be optimized with trade-offs in other cellular functions, suggesting nutrient quality is adaptable based on resource allocation.

Article Abstract

Bacteria like grow at vastly different rates on different substrates, however, the precise reason for this variability is poorly understood. Different growth rates have been attributed to 'nutrient quality', a key parameter in bacterial growth laws. However, it remains unclear to what extent nutrient quality is rooted in fundamental biochemical constraints like the energy content of nutrients, the protein cost required for their uptake and catabolism, or the capacity of the plasma membrane for nutrient transporters. Here, we show that while nutrient quality is indeed reflected in protein investment in substrate-specific transporters and enzymes, this is not a fundamental limitation on growth rate. We show that it is possible to turn mannose, one of the 'poorest' substrates of , into one of the 'best' substrates by reengineering chromosomal promoters of the mannose transporter and metabolic enzymes required for mannose degradation. However, we show that this faster growth rate comes at the cost of diverse cellular capabilities, reflected in longer lag phases, worse starvation survival and lower motility. We show that addition of cAMP to the medium can rescue these phenotypes but imposes a corresponding growth cost. Based on these data, we propose that nutrient quality is largely a self-determined, plastic property that can be modulated by the fraction of proteomic resources devoted to a specific substrate in the much larger proteome sector of catabolically activated genes. Rather than a fundamental biochemical limitation, nutrient quality reflects resource allocation decisions that are shaped by evolution in specific ecological niches and can be quickly adapted if necessary.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10473609PMC
http://dx.doi.org/10.1101/2023.08.22.554312DOI Listing

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