Macrophage heterogeneity in the single-cell era: facts and artifacts.

Blood

Mater Research Institute-University of Queensland, Translational Research Institute, Woolloongabba, QLD, Australia.

Published: October 2023

AI Article Synopsis

  • The single-cell analysis of tissue macrophages is affected by technical issues like low and biased cell yields, fragmentation, and activation during tissue breakdown.
  • These problems can result in incorrect identification of macrophage subpopulations and misrepresentation of macrophage-specific gene expression in other cell types.
  • Understanding these limitations is essential for accurately studying the diverse types of tissue-resident macrophages and their biological roles.

Article Abstract

In this spotlight, we review technical issues that compromise single-cell analysis of tissue macrophages, including limited and unrepresentative yields, fragmentation and generation of remnants, and activation during tissue disaggregation. These issues may lead to a misleading definition of subpopulations of macrophages and the expression of macrophage-specific transcripts by unrelated cells. Recognition of the technical limitations of single-cell approaches is required in order to map the full spectrum of tissue-resident macrophage heterogeneity and assess its biological significance.

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Source
http://dx.doi.org/10.1182/blood.2023020597DOI Listing

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