Physics-informed neural networks are used to characterize the mass transport to the rotating disk electrode (RDE), the most widely employed hydrodynamic electrode in electroanalysis. The PINN approach was first quantitatively verified via 1D simulations under the Levich approximation for cyclic voltammetry and chronoamperometry, allowing comparison of the results with finite difference simulations and analytical equations. However, the Levich approximation is only accurate for high Schmidt numbers ( > 1000). The PINN approach allowed consideration of smaller , achieving an analytical level of accuracy (error <0.1%) comparable with independent numerical evaluation and confirming that the errors in the Levich equation can be as high as 3% when = 1000 for rapidly diffusing species in aqueous solution. Entirely novel, the PINNs permit the solution of the 2D diffusion equation under cylindrical geometry incorporating radial diffusion and reveal the rotating disk electrode edge effect as a consequence of the nonuniform accessibility of the disc with greater currents flowing near the extremities. The contribution to the total current is quantified as a function of the rotation speed, disk radius, and analyte diffusion coefficient. The success in extending the theory for the rotating disk electrode beyond the Levich equation shows that PINNs can be an easier and more powerful substitute for conventional methods, both analytical and simulation based.
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http://dx.doi.org/10.1021/acs.analchem.3c01936 | DOI Listing |
Anal Chem
August 2023
Department of Chemistry, Physical and Theoretical Chemistry Laboratory, Oxford University, South Parks Road, Oxford OX1 3QZ, Great Britain.
Physics-informed neural networks are used to characterize the mass transport to the rotating disk electrode (RDE), the most widely employed hydrodynamic electrode in electroanalysis. The PINN approach was first quantitatively verified via 1D simulations under the Levich approximation for cyclic voltammetry and chronoamperometry, allowing comparison of the results with finite difference simulations and analytical equations. However, the Levich approximation is only accurate for high Schmidt numbers ( > 1000).
View Article and Find Full Text PDFJ Colloid Interface Sci
February 2022
Department of Materials Science and Engineering, Clemson University, Clemson, SC 29634, United States; Center for Optical Materials Science and Engineering Technologies (COMSET), Clemson University, Anderson, SC 29625, United States. Electronic address:
Hypothesis: The Landau-Levich-Derjaguin (LLD) theory is widely applied to predict the film thickness in the dip-coating process. However, the theory was designed only for flat plates and thin fibers. Fifty years ago, White and Tallmadge attempted to generalize the LLD theory to thick rods using a numerical solution for a static meniscus and the LLD theory to forcedly match their numeric solution with the LLD asymptotics.
View Article and Find Full Text PDFBMC Bioinformatics
July 2021
Levich Institute,Physics Department, City College of New York, New York, NY, 10031, USA.
Background: Gene regulatory networks coordinate the expression of genes across physiological states and ensure a synchronized expression of genes in cellular subsystems, critical for the coherent functioning of cells. Here we address the question whether it is possible to predict gene synchronization from network structure alone. We have recently shown that synchronized gene expression can be predicted from symmetries in the gene regulatory networks described by the concept of symmetry fibrations.
View Article and Find Full Text PDFAntibiotics (Basel)
July 2020
LEPABE-Laboratory for Process Engineering, Environment, Biotechnology and Energy, Faculty of Engineering, University of Porto, 4200-465 Porto, Portugal.
The aim of this work was to study the initial events of adhesion to polydimethylsiloxane, which is critical for the development of antifouling surfaces. A parallel plate flow cell was used to perform the initial adhesion experiments under controlled hydrodynamic conditions (shear rates ranging between 8 and 100/s), mimicking biomedical scenarios. Initial adhesion studies capture more accurately the cell-surface interactions as in later stages, incoming cells may interact with the surface but also with already adhered cells.
View Article and Find Full Text PDFJ Chem Phys
June 2020
Laboratory of Physical Chemistry, ETH Zürich, 8093 Zürich, Switzerland.
Marcus-Levich-Jortner (MLJ) theory is one of the most commonly used methods for including nuclear quantum effects in the calculation of electron-transfer rates and for interpreting experimental data. It divides the molecular problem into a subsystem treated quantum-mechanically by Fermi's golden rule and a solvent bath treated by classical Marcus theory. As an extension of this idea, we here present a "reduced" semiclassical instanton theory, which is a multiscale method for simulating quantum tunneling of the subsystem in molecular detail in the presence of a harmonic bath.
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