Computational and theoretical chemistry of newly synthesized and characterized 2,2-(5,5-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-acetamides.

BMC Chem

Departamento de Química, Facultad de Ciencias Exactas, CEQUINOR (UNLP, CONICET-CCT La Plata), Universidad Nacional de La Plata, C.C. 962 (1900), La Plata, República Argentina.

Published: August 2023

AI Article Synopsis

  • Energetic heterocycles like pyridines and tetrazoles have improved properties like density and heats of formation, making them suitable for creating new bis-tetrazole acetamides that could serve as effective compounds in aryl coupling reactions.
  • The synthesized compounds were analyzed using various spectroscopic methods and density functional theory to investigate their electronic properties and reactivity, revealing valuable insights into their molecular structure and behavior.
  • Molecular docking studies highlighted that certain synthesized heterocycles exhibited significant binding interactions with cancer-related proteins, suggesting their potential as therapeutic agents, supported by molecular dynamics simulations and theoretical evaluations of their energetic capabilities.

Article Abstract

Energetic heterocycles, including pyridines, triazoles, and tetrazoles, exhibit greater density, heats of formation, and oxygen balance compared to their carbocyclic counterparts, making them a promising approach for synthesizing novel bis-tetrazole acetamides. Synthesized compounds A-F, some of which feature a chlorine atom attached to the phenyl ring, serve as valuable synthons for aryl coupling reactions. Analysis via H-NMR and C-NMR spectroscopy, as well as density functional considerations through B3LYP functional correlation with 6-311 +  + G(d) and 6-31G(d) basis set, revealed the observed LUMO/HOMO energies and charge transfer within the molecule. Additionally, the dipole moment, chemical hardness, softness, ionization potential, local reactivity potential via Fukui indices and thermodynamic properties (entropy, enthalpy, and Gibbs free energy) of the molecule were calculated through density functional theory studies. In addition, Molecular Docking studies were conducted to investigate the anti-cancer potential of synthesized heterocyclic compounds against caspase 3, NF-KAPPA-B and P53 protein. Molecular docking analysis demonstrated a potent interaction between 2,2'-(5,5'-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2,4-dinitrophenyl) acetamides (6d) and TP53 and NF-KAPPA-B with binding energies of - 11.8 kJ/mol and - 10.9 kJ/mol for TP53 and NF-KAPPA-B, respectively. Similarly, 2,2'-(5,5'-(1,4-phenylene)bis(1H-tetrazole-5,1-diyl))bis-N-(2-chlorophenyl) acetamides (6f) exhibited a strong interaction with caspase-3 with binding energy of -10.0 kJ/mol, indicating their potential as therapeutic agents against these proteins. Furthermore, the findings of current study was further strengthen by 100 ns molecular dynamics (MD) simulations. Finally, theoretical studies of oxygen balance and nitrogen percentage suggest that these molecules can be utilized as energetic materials.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10426183PMC
http://dx.doi.org/10.1186/s13065-023-01011-3DOI Listing

Publication Analysis

Top Keywords

oxygen balance
8
density functional
8
molecular docking
8
tp53 nf-kappa-b
8
computational theoretical
4
theoretical chemistry
4
chemistry newly
4
newly synthesized
4
synthesized characterized
4
characterized 22-55-14-phenylenebis1h-tetrazole-51-diylbis-n-acetamides
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!