Wood is the most important natural and endlessly renewable source of energy. Despite the ecological and economic importance of wood, many aspects of its formation have not yet been investigated. We performed chromosome-scale genome assemblies of three timber trees (Ochroma pyramidale, Mesua ferrea, and Tectona grandis) which exhibit different wood properties such as wood density, hardness, growth rate, and fiber cell wall thickness. The combination of 10X, stLFR, Hi-Fi sequencing and HiC data led us to assemble high-quality genomes evident by scaffold N50 length of 55.97 Mb (O. pyramidale), 22.37 Mb (M. ferrea) and 14.55 Mb (T. grandis) with >97% BUSCO completeness of the assemblies. A total of 35774, 24027, and 44813 protein-coding genes were identified in M. ferrea, T. grandis and O. pyramidale, respectively. The data generated in this study is anticipated to serve as a valuable genetic resource and will promote comparative genomic analyses, and it is of practical importance in gaining a further understanding of the wood properties in non-model woody species.
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http://dx.doi.org/10.1038/s41597-023-02420-8 | DOI Listing |
Front Plant Sci
December 2024
School of Informatics, Hunan University of Chinese Medicine, Changsha, China.
Introduction: The Cinnamomum Camphora var. Borneol (CCB) tree is a valuable timber species with significant medicinal importance, widely cultivated in mountainous areas but susceptible to pests and diseases, making manual surveillance costly.
Methods: This paper proposes a method for detecting CCB pests and diseases using Unmanned aerial vehicle (UAV) as an advanced data collection carrier, capable of gathering large-scale data.
Mol Phylogenet Evol
December 2024
Université Libre de Bruxelles, Unit of Evolutionary Biology and Ecology CP160/12, Avenue Franklin Roosevelt 50, Brussels, B-1050, Belgium.
Reliable species delimitation is fundamental for establishing clear and equitable guidelines on the sustainable harvest of economically important organisms. Pterocarpus (Fabaceae) is a pantropical tree genus including several highly valuable timber-producing species, that face significant threats from intensive logging. However, a lack of taxonomic clarity has hindered the advance of logging regulations and has led to the inclusion of all African Pterocarpus populations under CITES regulations (CoP19).
View Article and Find Full Text PDFPlants (Basel)
November 2024
Instituto de Investigaciones en Ecosistemas y Sustentabilidad, Universidad Nacional Autónoma de México, Antigua Carretera a Pátzcuaro No. 8701, Morelia 58190, Michoacán, Mexico.
Wild edible trees (WETs) play an important role in the diet of many rural communities. Therefore, research on their use and management is important to support both food sovereignty and local conservation of biocultural resources. We evaluated the different uses of WETs by the community of Zacualpan, Colima, in western Mexico, through 32 semi-structured interviews registering the species richness, plant parts consumed, and non-food uses.
View Article and Find Full Text PDFFront Plant Sci
November 2024
Research Institute of Non-timber Forestry, Chinese Academy of Forestry, Key Laboratory of Non-timber Forest Germplasm Enhancement and Utilization of National Forestry and Grassland Administration, Zhengzhou, China.
PeerJ
December 2024
College of Forestry, Sichuan Agricultural University, Chengdu, Sichuan Province, China.
Background: The species holds substantial ecological value and economic potential, particularly in the realms of rehabilitating barren mountain landscapes and advancing urban greening endeavors. However, inadequate attention has been given to research endeavors exploring the genetic diversity and morphological characteristics of , a deficiency that could potentially hinder its development, utilization, and conservation of genetic resources.
Methods: To rectify the shortage of existing basic morphological data, a morphological analysis was conducted in this study on 180 germplasm resources sourced from five provenances.
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