A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@pubfacts.com&api_key=b8daa3ad693db53b1410957c26c9a51b4908&a=1): Failed to open stream: HTTP request failed! HTTP/1.1 429 Too Many Requests

Filename: helpers/my_audit_helper.php

Line Number: 176

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 176
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 250
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3122
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 575
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 489
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 316
Function: require_once

Extreme dynamics in a biomolecular condensate. | LitMetric

Proteins and nucleic acids can phase-separate in the cell to form concentrated biomolecular condensates. The functions of condensates span many length scales: they modulate interactions and chemical reactions at the molecular scale, organize biochemical processes at the mesoscale and compartmentalize cells. Understanding the underlying mechanisms of these processes will require detailed knowledge of the rich dynamics across these scales. The mesoscopic dynamics of biomolecular condensates have been extensively characterized, but their behaviour at the molecular scale has remained more elusive. Here, as an example of biomolecular phase separation, we study complex coacervates of two highly and oppositely charged disordered human proteins. Their dense phase is 1,000 times more concentrated than the dilute phase, and the resulting percolated interaction network leads to a bulk viscosity 300 times greater than that of water. However, single-molecule spectroscopy optimized for measurements within individual droplets reveals that at the molecular scale, the disordered proteins remain exceedingly dynamic, with their chain configurations interconverting on submicrosecond timescales. Massive all-atom molecular dynamics simulations reproduce the experimental observations and explain this apparent discrepancy: the underlying interactions between individual charged side chains are short-lived and exchange on a pico- to nanosecond timescale. Our results indicate that, despite the high macroscopic viscosity of phase-separated systems, local biomolecular rearrangements required for efficient reactions at the molecular scale can remain rapid.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11508043PMC
http://dx.doi.org/10.1038/s41586-023-06329-5DOI Listing

Publication Analysis

Top Keywords

molecular scale
16
dynamics biomolecular
8
biomolecular condensates
8
reactions molecular
8
biomolecular
5
extreme dynamics
4
biomolecular condensate
4
condensate proteins
4
proteins nucleic
4
nucleic acids
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!