and Genes in Garlic ( L.): Genome-Wide Identification, Characterization, and Stress Response.

Plants (Basel)

Research Center of Biotechnology, Institute of Bioengineering, Russian Academy of Sciences, Leninsky Ave. 33, Bld. 2, Moscow 119071, Russia.

Published: July 2023

Dehydration-responsive element-binding (DREB) transcription factors (TFs) of the A1 and A2 subfamilies involved in plant stress responses have not yet been reported in species. In this study, we used bioinformatics and comparative transcriptomics to identify and characterize A1 and A2 genes redundant in garlic ( L.) and analyze their expression in cultivars differing in the sensitivity to cold and infection. Eight A1 () and eight A2 () genes were identified. genes located in tandem on chromosome 1 had similar expression patterns, suggesting functional redundancy. were scattered on different chromosomes and had organ- and genotype-specific expressions. and promoters contained 7 and 9 hormone- and stress-responsive -regulatory elements, respectively, and 13 sites associated with TF binding and plant development. In both -resistant and -sensitive cultivars, fungal infection upregulated the , , , , and genes and downregulated , but the magnitude of response depended on the infection susceptibility of the cultivar. Cold exposure strongly upregulated the genes, but downregulated most genes. Our results provide the foundation for further functional analysis of the DREB TFs in crops and could contribute to the breeding of stress-tolerant varieties.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10347091PMC
http://dx.doi.org/10.3390/plants12132538DOI Listing

Publication Analysis

Top Keywords

upregulated genes
8
genes downregulated
8
genes
7
genes garlic
4
garlic genome-wide
4
genome-wide identification
4
identification characterization
4
characterization stress
4
stress response
4
response dehydration-responsive
4

Similar Publications

TRPV4 as a Novel Regulator of Ferroptosis in Colon Adenocarcinoma: Implications for Prognosis and Therapeutic Targeting.

Dig Dis Sci

January 2025

Ningxia Medical University, Xing Qing Block, Shengli Street No.1160, Yin Chuan City, 750004, Ningxia Province, People's Republic of China.

Background: Colon adenocarcinoma (COAD) is a leading cause of cancer-related mortality worldwide. Transient receptor potential vanilloid 4 (TRPV4), a calcium-permeable non-selective cation channel, has been implicated in various cancers, including COAD. This study investigates the role of TRPV4 in colon adenocarcinoma and elucidates its potential mechanism via the ferroptosis pathway.

View Article and Find Full Text PDF

Background: Infertility is a significant issue in spinal cord injury (SCI) patients. Men with SCI often experience erectile and ejaculatory dysfunctions, and low sperm quality leading to impaired fertility. In this study, we investigated the effectiveness of Erythropoietin (EPO)alginate/chitosan (CH-AL) hydrogel on SCI-induced male rat infertility.

View Article and Find Full Text PDF

IL-7 secreted by keratinocytes induces melanogenesis via c-kit/MAPK signaling pathway in Melan-a melanocytes.

Arch Dermatol Res

January 2025

Department of Genetics & Biotechnology, Graduate School of Biotechnology, College of Life Sciences, Kyung Hee University, Youngin, 17104, Republic of Korea.

Abnormal melanin synthesis within melanocytes can result in pigmentary skin disorders. Although pigmentation alterations associated with inflammation are frequently observed, the precise reason for this clinical observation is still unknown. More specifically, although many cytokines are known to be critical for inflammatory skin processes, it is unclear how they affect epidermal melanocyte function.

View Article and Find Full Text PDF

Aims: To investigate the effects of Lactococcus lactis subsp. lactis strains LL100933 and LL12007 on the host defense mechanisms of Caenorhabditis elegans against pathogenic infections and stressors.

Methods And Results: C.

View Article and Find Full Text PDF

Breast cancer patients experience more severe emotional distress and depression compared to those with other cancers. Selective serotonin reuptake inhibitors (SSRIs), like citalopram, are commonly used to treat depression. However, the link between SSRI use and breast cancer progression is debated.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!