PeakForce quantitative nanomechanical AFM mode (PF-QNM) is a popular AFM technique designed to measure multiple mechanical features (e.g., adhesion, apparent modulus, etc.) simultaneously at the exact same spatial coordinates with a robust scanning frequency. This paper proposes compressing the initial high-dimensional dataset obtained from the PeakForce AFM mode into a subset of much lower dimensionality by a sequence of proper orthogonal decomposition (POD) reduction and subsequent machine learning on the low-dimensionality data. A substantial reduction in user dependency and subjectivity of the extracted results is obtained. The underlying parameters, or "state variables", governing the mechanical response can be easily extracted from the latter using various machine learning techniques. Two samples are investigated to illustrate the proposed procedure (i) a polystyrene film with low-density polyethylene nano-pods and (ii) a PDMS film with carbon-iron particles. The heterogeneity of material, as well as the sharp variation in topography, make the segmentation challenging. Nonetheless, the underlying parameters describing the mechanical response naturally offer a compact representation allowing for a more straightforward interpretation of the high-dimensional force-indentation data in terms of the nature (and proportion) of phases, interfaces, or topography. Finally, those techniques come with a low processing time cost and do not require a prior mechanical model.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10224499PMC
http://dx.doi.org/10.3390/s23104730DOI Listing

Publication Analysis

Top Keywords

peakforce afm
8
afm mode
8
machine learning
8
underlying parameters
8
mechanical response
8
afm analysis
4
analysis enhanced
4
enhanced model
4
model reduction
4
reduction techniques
4

Similar Publications

Protocol for evaluating extracellular matrix stiffness post-decellularization of triple-negative breast cancer cells using atomic force microscopy.

STAR Protoc

December 2024

Biophysics and Structural Genomics Division, Saha Institute of Nuclear Physics, 1/AF Bidhannagar, Kolkata 700064, India; Homi Bhabha National Institute, Mumbai, India. Electronic address:

Article Synopsis
  • Atomic force microscopy (AFM) is used in biomedical research to study the mechanical properties of materials, specifically focusing on the stiffness of extracellular matrix (ECM) gels enriched with breast cancer cells.
  • The protocol involves using the PeakForce quantitative nanomechanics technique to measure the elastic modulus and capture images of the gel's surface topology.
  • Understanding how cancer cells influence the stiffness of artificial ECM can help researchers assess their role in tumor development and progression.
View Article and Find Full Text PDF

Schistosoma mansoni, an intravascular parasitic worm and the causative agent of schistosomiasis, relies on its tegument (outer layer) for survival and host interaction. This study explored the morphology and mechanical properties of S. mansoni tegument using Atomic Force Microscopy (AFM).

View Article and Find Full Text PDF

Environmental Influence on Stripe Formation at the Graphite-Water Interface.

Chemphyschem

December 2024

School of Engineering, STEM College, RMIT University, Australia Micro Nano Research Facility, RMIT University, Melbourne, Victoria, 3000, Australia.

Understanding the characteristics of graphite-water interfaces is of scientific significance and practical importance. Ordered stripe structures have been observed at this interface, with their origins debated between condensed gas molecules and airborne hydrocarbons. Atomic force microscopy (AFM) studies have revealed variations in the morphology, formation and growth of these ordered structures.

View Article and Find Full Text PDF
Article Synopsis
  • Carbon fiber reinforced polyamide-6 (CF/PA-6) composites are popular in various industries due to their strong mechanical properties, high thermal resistance, and recyclability.
  • The study utilized molecular dynamics (MD) simulations to explore interfacial properties at the atomic level, revealing that PA-6 chains interact with and crystallize on the carbon fiber surface.
  • Nano-mechanical tests showed a significant decrease in interfacial modulus and a notable increase in interfacial adhesion, confirming that the interfacial characteristics differ from those of the individual components.
View Article and Find Full Text PDF

The association of soil organic matter (SOM) with iron (Fe) oxyhydroxides, particularly ferrihydrite, plays a pivotal role in the biogeochemical cycling of carbon (C) in both terrestrial and aquatic environment. The aging of ferrihydrite to more crystalline phases can impact the stability of associated organic C, a process potentially influenced by aluminum (Al) substitution due to its abundance. However, the molecular mechanisms governing the temporal and spatial distribution of SOM during the aging process of Al-substituted Fe oxyhydroxides remain unclear.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!