Two novel bacterial isolates were cultured from faecal samples of patients attending the Breast Care clinic at the Norwich and Norfolk University Hospital. Strain LH1062 was isolated from a 58-year-old female diagnosed with invasive adenocarcinoma with ductal carcinoma . Strain LH1063 was isolated from a healthy 51-year-old female. Isolate LH1062 was predicted to be a potential novel genus most closely related to , whilst LH1063 was predicted to be a novel species belonging to . Both strains were characterized by polyphasic approaches including 16S rRNA gene analysis, core-genome analysis, average nucleotide identity (ANI) comparisons and phenotypic analysis. Initial screening of the 16S rRNA gene of LH1062 returned a nucleotide identity of 93.4 % to . For LH1063, nucleotide identity was a 92.6 % to . Further investigations showed that LH1062 had a genome size of 2.9 Mb and G+C content of 31.3 mol %. LH1063 had a genome size of 3.3Mb and G+C content of 39.2 mol %. Digital DNA-DNA hybridization (dDDH) and ANI values of LH1062 with its closest relative, JCM 10604, were 20.9 and 79.54 %, respectively. For LH1063, the dDDH and ANI values with its closest relative, 177, were 19.3 and 77.81 %, respectively. Phenotypic testing confirmed that LH1062 could not be matched to a known validly published isolate in any database; thereby indicating a novel genus for which the name gen. nov. is now proposed with LH1062 (=DSM 114537=NCTC 14686) being the type strain of the proposed novel species sp. nov. Strain LH1063 (=DSM 114538=NCTC 14698) fits within the genus and, it being the third species within this genus, the name sp. nov. is proposed.
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http://dx.doi.org/10.1099/ijsem.0.005950 | DOI Listing |
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