-alkylation and -metallation of pyridine are explored herein to understand how metal-ligand complexes can model NAD redox chemistry. Syntheses of substituted dipyrazolylpyridine (pzP) compounds (pzP)Me (1) and (pzP)GaCl (2) are reported, and compared with (pzP)AlCl(THF) and transition element pzP complexes from previous reports. Cyclic voltammetry measurements of cationic 1 and 2 show irreversible reduction events ∼900 mV anodic those for neutral pzP complexes of divalent metals. We proposed that -metallation using Group 13 ions of 3+ charge provides an electrochemical model for -alkylated pyridyls like NAD.
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http://dx.doi.org/10.1039/d3cc02562d | DOI Listing |
Clin Proteomics
May 2024
Center for Cellular and Molecular Diagnostics, Tulane University School of Medicine, New Orleans, LA, USA.
Background: Traumatic brain injury (TBI) often results in diverse molecular responses, challenging traditional proteomic studies that measure average changes at tissue levels and fail to capture the complexity and heterogeneity of the affected tissues. Spatial proteomics offers a solution by providing insights into sub-region-specific alterations within tissues. This study focuses on the hippocampal sub-regions, analyzing proteomic expression profiles in mice at the acute (1 day) and subacute (7 days) phases of post-TBI to understand subregion-specific vulnerabilities and long-term consequences.
View Article and Find Full Text PDFNat Struct Mol Biol
July 2024
Department of Pharmacology, University of Colorado School of Medicine, Aurora, CO, USA.
J Proteome Res
November 2023
The Laboratory of Medical Genetics, Harbin Medical University, Harbin 150081, China.
Identification of unique and specific biomarkers to better detect and quantify senescent cells remains challenging. By a global proteomic profiling of senescent human skin BJ fibroblasts induced by ionizing radiation (IR), the cellular level of pregnancy zone protein (PZP), a presumable pan-protease inhibitor never been linked to cellular senescence before, was found to be decreased by more than 10-fold, while the level of PZP in the conditioned medium was increased concomitantly. This observation was confirmed in a variety of senescent cells induced by IR or DNA-damaging drugs, indicating that high-level secretion of PZP is a novel senescence-associated secretory phenotype.
View Article and Find Full Text PDFSTAR Protoc
June 2021
Department of Pharmacology, University of Colorado School of Medicine, Aurora, CO 80045, USA.
The core subunit of the MORF acetyltransferase complex BRPF1 contains a unique combination of zinc fingers, including a plant homeodomain (PHD) finger followed by a zinc knuckle and another PHD finger, which together form a PZP domain (BRPF1). BRPF1 has been shown to bind to the nucleosome and make contacts with both histone H3 tail and DNA. Here, we describe biophysical and structural methods for characterization of the interactions between BRPF1, H3 tail, DNA, and the intact nucleosome.
View Article and Find Full Text PDFJ Biomol Struct Dyn
November 2022
Biomolecular Research Group, Biochemistry Program, Institute of Biological Sciences, Faculty of Science, University of Malaya, Kuala Lumpur, Malaysia.
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