PreOBP_ML: Machine Learning Algorithms for Prediction of Optical Biosensor Parameters.

Micromachines (Basel)

Division of Biomedical Engineering, Department of Computer Science and Department of Mechanical Engineering, University of Saskatchewan, Saskatoon, SK S7N 5A9, Canada.

Published: May 2023

To develop standard optical biosensors, the simulation procedure takes a lot of time. For reducing that enormous amount of time and effort, machine learning might be a better solution. Effective indices, core power, total power, and effective area are the most crucial parameters for evaluating optical sensors. In this study, several machine learning (ML) approaches have been applied to predict those parameters while considering the core radius, cladding radius, pitch, analyte, and wavelength as the input vectors. We have utilized least squares (LS), LASSO, Elastic-Net (ENet), and Bayesian ridge regression (BRR) to make a comparative discussion using a balanced dataset obtained with the COMSOL Multiphysics simulation tool. Furthermore, a more extensive analysis of sensitivity, power fraction, and confinement loss is also demonstrated using the predicted and simulated data. The suggested models were also examined in terms of R2-score, mean average error (MAE), and mean squared error (MSE), with all of the models having an R2-score of more than 0.99, and it was also shown that optical biosensors had a design error rate of less than 3%. This research might pave the way for machine learning-based optimization approaches to be used to improve optical biosensors.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10302917PMC
http://dx.doi.org/10.3390/mi14061174DOI Listing

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