A data-driven sequencer that unveils latent "codons" in synthetic copolymers.

Chem Sci

Data-driven Polymer Design Group, Research and Services Division of Materials Data and Integrated System, National Institute for Materials Science 1-2-1, Sengen Tsukuba Ibaraki 305-0047 Japan

Published: May 2023

The recent emergence of sequence engineering in synthetic copolymers has been innovating polymer materials, where short sequences, hereinafter called "codons" using an analogy from nucleotide triads, play key roles in expressing functions. However, the codon compositions cannot be experimentally determined owing to the lack of efficient sequencing methods, hindering the integration of experiments and theories. Herein, we propose a polymer sequencer based on mass spectrometry of pyrolyzed oligomeric fragments. Despite the random fragmentation along copolymer main-chains, the characteristic fragment patterns of the codons are identified and quantified unsupervised learning of a spectral dataset of random copolymers. The codon complexities increase with their length and monomer component number. Our data-driven approach accommodates the increasing complexities by expanding the dataset; the codon compositions of binary triads, binary pentads and ternary triads are quantifiable with small datasets ( < 100). The sequencer allows describing copolymers with their codon compositions/distributions, facilitating sequence engineering toward innovative polymer materials.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10231333PMC
http://dx.doi.org/10.1039/d2sc06974aDOI Listing

Publication Analysis

Top Keywords

synthetic copolymers
8
sequence engineering
8
polymer materials
8
codon compositions
8
copolymers codon
8
data-driven sequencer
4
sequencer unveils
4
unveils latent
4
latent "codons"
4
"codons" synthetic
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!