Superpixel-guided class-level denoising for unsupervised domain adaptive fundus image segmentation without source data.

Comput Biol Med

Department of Biomedical Engineering, The Chinese University of Hong Kong, Shatin, Hong Kong, China. Electronic address:

Published: August 2023

Unsupervised domain adaptation (UDA), which is used to alleviate the domain shift between the source domain and target domain, has attracted substantial research interest. Previous studies have proposed effective UDA methods which require both labeled source data and unlabeled target data to achieve desirable distribution alignment. However, due to privacy concerns, the vendor side often can only trade the pretrained source model without providing the source data to the targeted client, leading to failed adaptation by classical UDA techniques. To address this issue, in this paper, a novel Superpixel-guided Class-level Denoised self-training framework (SCD) is proposed, aiming at effectively adapting the pretrained source model to the target domain in the absence of source data. Since the source data is unavailable, the model can only be trained on the target domain with the pseudo labels obtained from the pretrained source model. However, due to domain shift, the predictions obtained by the source model on the target domain are noisy. Considering this, we propose three mutual-reinforcing components tailored to our self-training framework: (i) an adaptive class-aware thresholding strategy for more balanced pseudo label generation, (ii) a masked superpixel-guided clustering method for generating multiple content-adaptive and spatial-adaptive feature centroids that enhance the discriminability of final prototypes for effective prototypical label denoising, and (iii) adaptive learning schemes for suspected noisy-labeled and correct-labeled pixels to effectively utilize the valuable information available. Comprehensive experiments on multi-site fundus image segmentation demonstrate the superior performance of our approach and the effectiveness of each component.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.compbiomed.2023.107061DOI Listing

Publication Analysis

Top Keywords

source data
20
target domain
16
source model
16
pretrained source
12
source
10
domain
9
superpixel-guided class-level
8
unsupervised domain
8
fundus image
8
image segmentation
8

Similar Publications

High Detection Rate of Rotavirus Infection Among Children Admitted with Acute Gastroenteritis to Six Public Hospitals in Luanda Province After the Introduction of Rotarix Vaccine: A Cross-Sectional Study.

Viruses

December 2024

Associate Laboratory for Animal and Veterinary Sciences (AL4AnimalS), Interdisciplinary Center for Research in Animal Health (CIISA), Faculty of Veterinary Medicine, University of Lisbon, 1300-477 Lisbon, Portugal.

Rotavirus group A (RVA) is a major cause of pediatric acute gastroenteritis (AGE). Vaccination is an effective public health strategy and Angola implemented it in 2014. This hospital-based study aimed to estimate the prevalence of RVA infection and the severity of AGE in children under five years of age treated at six hospitals in Luanda Province.

View Article and Find Full Text PDF

Setting up a global SARS-CoV-2 surveillance system requires an understanding of how virus isolation and propagation practices, use of animal or human sera, and different neutralisation assay platforms influence assessment of SARS-CoV-2 antigenicity. In this study, with the contribution of 15 independent laboratories across all WHO regions, we carried out a controlled analysis of neutralisation assay platforms using the first WHO International Standard for antibodies to SARS-CoV-2 variants of concern (source: NIBSC). Live virus isolates (source: WHO BioHub or individual labs) or spike plasmids (individual labs) for pseudovirus production were used to perform neutralisation assays using the same serum panels.

View Article and Find Full Text PDF

Efficiency of Bacteriophage-Based Detection Methods for Non-Typhoidal in Foods: A Systematic Review.

Viruses

November 2024

Centre for Epidemiology and Planetary Health, School of Veterinary Medicine, Scotland's Rural College, Inverness IV2 5NA, UK.

Food contamination with non-typhoidal (NTS) presents a significant public health risk, underscoring the critical need for rigorous food safety measures throughout the production, distribution, preparation, and consumption stages. Conventional diagnostic strategies are time-consuming and labor-intensive and are thus sub-optimal for throughput NTS detection. Bacteriophages (phages) are highly specialized bacterial viruses and exhibit extreme specificity for their hosts.

View Article and Find Full Text PDF

In response to the COVID-19 pandemic, Israel prioritized pregnant women for vaccination, recognizing them as a high-risk group. This study aims to explore factors influencing the acceptance of Influenza, Pertussis (T-dap), and COVID-19 vaccines among pregnant women, focusing on attitudes, social norms, perceived control, and risk perceptions. Additionally, the study compares acceptance patterns between traditional vaccines and the newer COVID-19 vaccine.

View Article and Find Full Text PDF

Objectives: Herpes zoster (HZ), caused by varicella zoster virus reactivation, affects a significant portion of the population, leading to substantial morbidity. Vaccination is highly effective in preventing HZ, yet awareness and uptake remain low. This study assessed awareness and willingness to vaccinate against HZ in Poland following the introduction of a reimbursement policy.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!