Overcoming lysogenization defect (OLD) proteins are a conserved family of ATP-powered nucleases that function in anti-phage defense. Recent bioinformatic, genetic, and crystallographic studies have yielded new insights into the structure, function, and evolution of these enzymes. Here we review these developments and propose a new classification scheme to categorize OLD homologs that relies on gene neighborhoods, biochemical properties, domain organization, and catalytic machinery. This taxonomy reveals important similarities and differences between family members and provides a blueprint to contextualize future in vivo and in vitro findings. We also detail how OLD nucleases are related to PARIS and Septu anti-phage defense systems and discuss important mechanistic questions that remain unanswered.

Download full-text PDF

Source
http://dx.doi.org/10.1111/mmi.15074DOI Listing

Publication Analysis

Top Keywords

anti-phage defense
8
structural functional
4
functional bioinformatic
4
bioinformatic advances
4
advances redefined
4
redefined neglected
4
neglected nuclease
4
nuclease family
4
family overcoming
4
overcoming lysogenization
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!