Reliable disease management can guarantee healthy plant production and relies on the knowledge of pathogen prevalence. Modeling the dynamic changes in spore concentration is available for realizing this purpose. We present a novel model based on a time-series modeling machine learning method, i.e., a long short-term memory (LSTM) network, to analyze oomycete Plasmopara viticola sporangia concentration dynamics using data from a 4-year field experiment trial in North China. Principal component analysis (PCA)-based high-quality input screening and simulation result calibration were performed to ensure model performance, obtaining a high determination coefficient (0.99), a low root mean square error (0.87), and a low mean bias error (0.55), high sensitivity (91.5%), and high specificity (96.5%). The impact of the variability of relative factors on daily P. viticola sporangia concentrations was analyzed, confirming that a low daily mean air temperature restricts pathogen development even during a long period of high humidity in the field.
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http://dx.doi.org/10.1007/s00484-022-02419-7 | DOI Listing |
Plant Phenomics
September 2024
Guangxi Crop Genetic Improvement and Biotechnology Key Lab, Guangxi Academy of Agricultural Sciences, Nanning 530007, China.
Monitoring spores is crucial for predicting and preventing fungal- or oomycete-induced diseases like grapevine downy mildew. However, manual spore or sporangium detection using microscopes is time-consuming and labor-intensive, often resulting in low accuracy and slow processing speed. Emerging deep learning models like YOLOv8 aim to rapidly detect objects accurately but struggle with efficiency and accuracy when identifying various sporangia formations amidst complex backgrounds.
View Article and Find Full Text PDFPhytopathology
June 2024
College of Forestry, Hebei Agricultural University, Baoding 071000, China.
A phenomenon of pathogenicity attenuation of was consistently observed during its subculture on grape. To clarify the causes of attenuated pathogenicity of , culturable microbes were isolated from the mass (mycelia, sporangiophores, and sporangia) in each generation and tested for their biocontrol efficacies on grape downy mildew (GDM). The results showed that the incidence of GDM decreased with the increase in the number of subculture times on both vineyard-collected leaves and grape leaves from in vitro-grown seedlings.
View Article and Find Full Text PDFPlants (Basel)
August 2023
Department of Sustainable Crop Production, Università Cattolica del Sacro Cuore, Via Emilia Parmense, 84, 29122 Piacenza, Italy.
Plant resistance inducers (PRIs) harbor promising potential for use in downy mildew (DM) control in viticulture. Here, the effects of six commercial PRIs on some epidemiological components of (Pv) on grapevine leaves were studied over 3 years. Disease severity, mycelial colonization of leaf tissue, sporulation severity, production of sporangia on affected leaves, and per unit of DM lesion were evaluated by inoculating the leaves of PRI-treated plants at 1, 3, 6, 12, and 19 days after treatment (DAT).
View Article and Find Full Text PDFInt J Biometeorol
June 2023
Beijing Key Laboratory of Environment Friendly Management On Fruit Diseases and Pests in North China, Institute of Plant Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China.
Reliable disease management can guarantee healthy plant production and relies on the knowledge of pathogen prevalence. Modeling the dynamic changes in spore concentration is available for realizing this purpose. We present a novel model based on a time-series modeling machine learning method, i.
View Article and Find Full Text PDFPLoS One
January 2023
Institut de Génomique Fonctionnelle de Lyon (IGFL), CNRS UMR 5242, Ecole Normale Supérieure de Lyon, INRAE USC 1370, Université Claude Bernard Lyon 1, Lyon, France.
Downy mildew is caused by Plasmopara viticola, an obligate oomycete plant pathogen, a devasting disease of grapevine. To protect plants from the disease, complex III inhibitors are among the fungicides widely used. They specifically target the mitochondrial cytochrome b (cytb) of the pathogen to block cellular respiration mechanisms.
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