Alteration of the structure of soil microbial communities following the elimination of hydrophobic organic pollutants (e.g., polycyclic aromatic hydrocarbons, PAHs) is generally assessed using DNA-based techniques, and soil is often required to dry prior to pollutant addition, to facilitate a better mix when establishing microcosms. However, the drying practice may have a legacy effect on soil microbial community structure, which would in turn influence the biodegradation process. Here, we used C-labeled phenanthrene to examine the potential side effects of precedent short-term drought events. The results indicate that the drying practice had legacy effects on soil microbial community structure, illustrated by irreversible shifts in the communities. The legacy effects had no significant impact on phenanthrene mineralization and non-extractable residue formation. However, they altered the response of bacterial communities to PAH degradation, leading to a decrease in the abundance of potential PAH degradation genes plausibly attributed to moderately abundant taxa. Based on a comparison of the varied effects of different drying intensity levels, an accurate description of microbial responses to phenanthrene degradation strongly relies on the establishment of stable microbial communities before PAH amendment. Concurrent alterations in the communities resulting from environmental perturbation could greatly mask minor alterations from the degradation of recalcitrant hydrophobic PAH. In practice, to minimize the legacy effects, a soil equilibration step with a reduced drying intensity is indispensable.
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http://dx.doi.org/10.1016/j.envpol.2023.121909 | DOI Listing |
Environ Microbiol
January 2025
Department of Biochemistry, Genetics and Microbiology, Centre for Microbial Ecology and Genomics, University of Pretoria, Pretoria, South Africa.
Plant detritus is abundant in grasslands but decomposes slowly and is relatively nutrient-poor, whereas animal carcasses are labile and nutrient-rich. Recent studies have demonstrated that labile nutrients from carcasses can significantly alter the long-term soil microbial function at an ecosystem scale. However, there is a paucity of knowledge on the functional and structural response and temporal scale of soil microbiomes beneath large herbivore carcasses.
View Article and Find Full Text PDFGlob Chang Biol
January 2025
Department of Renewable Resources, University of Alberta, Edmonton, Canada.
Soil microorganisms transform plant-derived C (carbon) into particulate organic C (POC) and mineral-associated C (MAOC) pools. While microbial carbon use efficiency (CUE) is widely recognized in current biogeochemical models as a key predictor of soil organic carbon (SOC) storage, large-scale empirical evidence is limited. In this study, we proposed and experimentally tested two predictors of POC and MAOC pool formation: microbial necromass (using amino sugars as a proxy) and CUE (by O-HO approach).
View Article and Find Full Text PDFBMC Plant Biol
January 2025
Department of Soil Science, University of Tehran, Tehran, Iran.
Soil compaction is a pressing issue in agriculture that significantly hinders plant growth and soil health, necessitating effective strategies for mitigation. This study examined the effects of sugarcane bagasse, both in its raw form and as biochar, along with biological activators (Bacillus simplex UTT1 and Phanerochaete chrysosporium) on soil characteristics and corn (Zea mays L.) plant biomass in a compacted soil.
View Article and Find Full Text PDFBMC Microbiol
January 2025
Center for Nuclear Energy in Agriculture, University of São Paulo, Piracicaba, SP, Brazil.
Amazonian Dark Earths (ADEs) are fertile soils from the Amazon rainforest that harbor microorganisms with biotechnological potential. This study aimed to investigate the individual and potential synergistic effects of a 2% portion of ADEs and Urochloa brizantha cv. Marandu roots (Brazil's most common grass species used for pastures) on soil prokaryotic communities and overall soil attributes in degraded soil.
View Article and Find Full Text PDFSci Rep
January 2025
College of Civil Engineering, Liaoning Technical University, Fuxin, 123000, P. R. China.
Aeolian sandy soil is barren and readily leads to low fertilizer utilization rates and yields. Therefore, it is imperative to improve the water and fertilizer retention capacity of these soils. In this paper, three kinds of biochar (rice husk, corn stalk, and bamboo charcoal) and bentonite were used as amendments in the first year of the experiment.
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