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lncRNA TRHDE-AS1 Correlated with Genomic Landscape and Clinical Outcome in Glioma. | LitMetric

lncRNA TRHDE-AS1 Correlated with Genomic Landscape and Clinical Outcome in Glioma.

Genes (Basel)

Department of Neuro-Oncology, Cancer Center, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.

Published: May 2023

AI Article Synopsis

  • Research highlights the increasing importance of long non-coding RNAs (lncRNAs) in cancer, specifically noting significant roles for various lncRNAs in glioma development.
  • The study focuses on TRHDE-AS1, revealing its correlation with tumor prognosis and differences in expression across various glioma classification types, suggesting its relevance in glioma pathology.
  • Findings indicate that TRHDE-AS1 may influence synapse-related functions and is linked to key cancer driver genes, as well as the glioma immune microenvironment, positioning it as a potential biomarker for glioma prognosis.

Article Abstract

The role of lncRNA in cancer development has received more and more attention in research. A variety of lncRNAs are associated with the occurrence and development of glioma. However, the role of TRHDE-AS1 in glioma is still unknown. In this study, we explored the role of TRHDE-AS1 in glioma through bioinformatic methods. We first identified an association between TRHDE-AS1 and tumor prognosis in pan-cancer analysis. Subsequently, the expression levels of TRHDE-AS1 in various clinical types of glioma were compared, and significant differences were found in pathological classification, WHO classification, molecular classification, IDH mutation, and age stratification. We analyzed the genes co-expressed with TRHDE-AS1 in glioma. In the functional analysis of TRHDE-AS1, we found that TRHDE-AS1 may be involved in the regulation of synapse-related functions. In glioma cancer driver gene correlation analysis, it was also found that TRHDE-AS1 was significantly correlated with the expression levels of multiple driver genes such as TP53, BRAF, and IDH1. By comparing the mutant profiles of the high and low TRHDE-AS1 groups, we also found that there may be differences in TP53 and CIC gene mutations in low-grade gliomas. Subsequent correlation analysis between TRHDE-AS1 and glioma immune microenvironment showed that the expression level of TRHDE-AS1 was correlated with a variety of immune cells. Therefore, we believe that TRHDE-AS1 is involved in the occurrence and development of glioma and has the ability to predict the prognosis of glioma as a biomarker of glioma.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10217926PMC
http://dx.doi.org/10.3390/genes14051052DOI Listing

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