Crop models have been developed for wide research purposes and scales, but they have low compatibility due to the diversity of current modeling studies. Improving model adaptability can lead to model integration. Since deep neural networks have no conventional modeling parameters, diverse input and output combinations are possible depending on model training. Despite these advantages, no process-based crop model has been tested in full deep neural network complexes. The objective of this study was to develop a process-based deep learning model for hydroponic sweet peppers. Attention mechanism and multitask learning were selected to process distinct growth factors from the environment sequence. The algorithms were modified to be suitable for the regression task of growth simulation. Cultivations were conducted twice a year for 2 years in greenhouses. The developed crop model, DeepCrop, recorded the highest modeling efficiency (= 0.76) and the lowest normalized mean squared error (= 0.18) compared to accessible crop models in the evaluation with unseen data. The t-distributed stochastic neighbor embedding distribution and the attention weights supported that DeepCrop could be analyzed in terms of cognitive ability. With the high adaptability of DeepCrop, the developed model can replace the existing crop models as a versatile tool that would reveal entangled agricultural systems with analysis of complicated information.
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http://dx.doi.org/10.34133/plantphenomics.0035 | DOI Listing |
Front Plant Sci
January 2025
Information and Communication Engineering, Yeungnam University, Gyeongsan, Republic of Korea.
Smart farming is a hot research area for experts globally to fulfill the soaring demand for food. Automated approaches, based on convolutional neural networks (CNN), for crop disease identification, weed classification, and monitoring have substantially helped increase crop yields. Plant diseases and pests are posing a significant danger to the health of plants, thus causing a reduction in crop production.
View Article and Find Full Text PDFMol Ecol Resour
January 2025
USDA, Agricultural Research Service, Southern Plains Agricultural Research Center, Insect Control and Cotton Disease Research Unit, College Station, Texas, USA.
The boll weevil, Anthonomus grandis grandis Boheman, and thurberia weevil, Anthonomus grandis thurberiae Pierce, together comprise a species complex that ranges throughout Mexico, the southwestern regions of the United States and parts of South America. The boll weevil is a historically damaging and contemporaneously threatening pest to commercial upland cotton, Gossypium hirsutum L. (Malvales: Malvaceae), whereas the thurberia weevil is regarded as an innocuous non-pest subspecies that is mostly found on non-cultivated Thurber's or Arizona cotton, Gossypium thurberi L.
View Article and Find Full Text PDFSci Rep
January 2025
Department of Plant Breeding and Genetics, Punjab Agricultural University, Ludhiana, Punjab, India.
Waterlogging (WL) is an important abiotic stress, severely affecting plant growth and development, inhibiting root respiration and degradation of chlorophyll, senescence of leaves and chlorosis leading to substantial yield loss. These intensities of yield losses generally depend on the duration of WL and crop growth stages. Maize being a dry land crop is particularly sensitive to WL.
View Article and Find Full Text PDFNat Plants
January 2025
National Key Laboratory of Plant Molecular Genetics, CAS Center for Excellence in Molecular Plant Sciences, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai, China.
Arabidopsis PHOSPHATE 1 (AtPHO1) and its closest homologue AtPHO1;H1 are phosphate transporters that load phosphate into the xylem vessel for root-to-shoot translocation. AtPHO1 and AtPHO1;H1 are prototypical members of the unique SPX-EXS family, whose structural and molecular mechanisms remain elusive. In this study, we determined the cryogenic electron microscopy structure of AtPHO1;H1 binding with inorganic phosphate (Pi) and inositol hexakisphosphate in a closed conformation.
View Article and Find Full Text PDFSci Rep
January 2025
Research Center of Fluid Machinery Engineering and Technology, Jiangsu University, Zhenjiang, 212013, China.
Soil salinization is the most prevalent form of land degradation in arid, semi-arid, and coastal regions of China, posing significant challenges to local crop yield, economic development, and environmental sustainability. However, limited research exists on estimating soil salinity at different depths under vegetation cover. This study employed field-controlled soil experiments to collect multi-source remote sensing data on soil salt content (SSC) at varying depths beneath barley growth.
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