Three-photon (3P) microscopy is getting traction due to its superior performance in deep tissues. Yet, aberrations and light scattering still pose one of the main limitations in the attainable depth ranges for high-resolution imaging. Here, we show scattering correcting wavefront shaping with a simple continuous optimization algorithm, guided by the integrated 3P fluorescence signal. We demonstrate focusing and imaging behind scattering layers and investigate convergence trajectories for different sample geometries and feedback non-linearities. Furthermore, we show imaging through a mouse skull and demonstrate a novel, to the best of our knowledge, fast phase estimation scheme that substantially increases the speed at which the optimal correction can be found.
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http://dx.doi.org/10.1364/OL.468834 | DOI Listing |
J Med Imaging (Bellingham)
December 2024
University of Houston, Department of Physics, Houston, Texas, United States.
Purpose: Photon counting detectors offer promising advancements in computed tomography (CT) imaging by enabling the quantification and three-dimensional imaging of contrast agents and tissue types through simultaneous multi-energy projections from broad X-ray spectra. However, the accuracy of these decomposition methods hinges on precise composite spectral attenuation values that one must reconstruct from spectral micro-CT. Errors in such estimations could be due to effects such as beam hardening, object scatter, or detector sensor-related spectral distortions such as fluorescence.
View Article and Find Full Text PDFSpectrochim Acta A Mol Biomol Spectrosc
December 2024
College of Artificial Intelligence, Nankai University, Tianjin 300350, China.
The main objective of this study was to evaluate the potential of near infrared (NIR) spectroscopy and machine learning in detecting microplastics (MPs) in chicken feed. The application of machine learning techniques in building optimal classification models for MPs-contaminated chicken feeds was explored. 80 chicken feed samples with non-contaminated and 240 MPs-contaminated chicken feed samples including polypropylene (PP), polyvinyl chloride (PVC), and polyethylene terephthalate (PET) were prepared, and the NIR diffuse reflectance spectra of all the samples were collected.
View Article and Find Full Text PDFYing Yong Sheng Tai Xue Bao
October 2024
Research Institute of Subtropical Forestry, Chinese Academy of Forestry/Zhejiang Key Laboratory of Forest Genetics and Bree-ding, Hangzhou 311400, China.
To rapidly acquire fiber phenotypic data for wood quality assessment, we used a portable NIR spectro-meter to collect spectral data in 100 individuals of at 18-year-old of 20 different provenances, and simultaneously collected wood cores. Wood basic density and the anatomical structure of wood fiber were measured. The standard normal variate (SNV), orthogonal signal correction (OSC), and multiplicative scatter correction (MSC) methods were used for spectral preprocessing, the competitive adaptive reweighted sampling (CARS) method were used for wavelength selection, and the partial least squares regression (PLSR) model were established.
View Article and Find Full Text PDFHum Gene Ther
December 2024
Prevail Therapeutics, New York, New York, USA.
Recombinant adeno-associated virus (AAV) is one of the main viral vector-based gene therapy platforms. AAV is a virus consisting of a ≈25 nm diameter capsid with a ≈4.7 kb cargo capacity.
View Article and Find Full Text PDFBiophys J
December 2024
School of Computer Science and Engineering, The Hebrew University of Jerusalem, Israel. Electronic address:
Advanced deep learning and statistical methods can predict structural models for RNA molecules. However, RNAs are flexible, and it remains difficult to describe their macromolecular conformations in solutions where varying conditions can induce conformational changes. Small-angle X-ray scattering (SAXS) in solution is an efficient technique to validate structural predictions by comparing the experimental SAXS profile with those calculated from predicted structures.
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