In order to improve the regulatory efficiency of the government in the construction process of the green financial system, the multi-stage dynamic evolution game model of green financial system from the perspective of bilateral moral risk is constructed and analyzed. It is found that cost-controllable and profitable collaborative innovation are the fundamental to realize the sustainable cooperation of green innovation between financial institutions and carbon emission enterprises. The introduction of reward and punishment mechanism and transfer payment mechanism for government is conducive to promoting the willingness of financial institutions and carbon emission enterprises to cooperate in green innovation. However, with the increase of appeal willingness of carbon emission enterprises and the cost reduction of appeal, although the risk of illegal arbitrage of financial institutions can be curbed to a certain extent, there is a risk of deterioration in the collaborative relationship between financial institutions and carbon emission enterprises.
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