Transformer-based methods are recently popular in vision tasks because of their capability to model global dependencies alone. However, it limits the performance of networks due to the lack of modeling local context and global-local correlations of multi-scale features. In this paper, we present MISSFormer, a Medical Image Segmentation tranSFormer. MISSFormer is a hierarchical encoder-decoder network with two appealing designs: 1) a feed-forward network in transformer block of U-shaped encoder-decoder structure is redesigned, ReMix-FFN, which explore global dependencies and local context for better feature discrimination by re-integrating the local context and global dependencies; 2) a ReMixed Transformer Context Bridge is proposed to extract the correlations of global dependencies and local context in multi-scale features generated by our hierarchical transformer encoder. The MISSFormer shows a solid capacity to capture more discriminative dependencies and context in medical image segmentation. The experiments on multi-organ, cardiac segmentation and retinal vessel segmentation tasks demonstrate the superiority, effectiveness and robustness of our MISSFormer. Specifically, the experimental results of MISSFormer trained from scratch even outperform state-of-the-art methods pre-trained on ImageNet, and the core designs can be generalized to other visual segmentation tasks. The code has been released on Github: https://github.com/ZhifangDeng/MISSFormer.

Download full-text PDF

Source
http://dx.doi.org/10.1109/TMI.2022.3230943DOI Listing

Publication Analysis

Top Keywords

global dependencies
16
local context
16
medical image
12
image segmentation
12
multi-scale features
8
dependencies local
8
segmentation tasks
8
missformer
6
segmentation
6
context
6

Similar Publications

Microglia-resident immune cells in the central nervous system-undergo morphological and functional changes in response to signals from the local environment and mature into various homeostatic states. However, niche signals underlying microglial differentiation and maturation remain unknown. Here, we show that neuronal micronuclei (MN) transfer to microglia, which is followed by changing microglial characteristics during the postnatal period.

View Article and Find Full Text PDF

Evolution of the umbilical cord blood proteome across gestational development.

Sci Rep

January 2025

Department of Pediatrics, Division of Infectious Diseases, Ann & Robert H. Lurie Children's Hospital of Chicago, Northwestern University Feinberg School of Medicine, Chicago, IL, USA.

Neonatal health is dependent on early risk stratification, diagnosis, and timely management of potentially devastating conditions, particularly in the setting of prematurity. Many of these conditions are poorly predicted in real-time by clinical data and current diagnostics. Umbilical cord blood may represent a novel source of molecular signatures that provides a window into the state of the fetus at birth.

View Article and Find Full Text PDF

Machine-learning for discovery of descriptors for gas-sensing: A case study of doped metal oxides.

Talanta

January 2025

Faculty of Electrical Engineering and Computer Science, Ningbo University, Ningbo, 315211, China. Electronic address:

Conventionally, gas sensors are studied based on functional materials, case by case, using experimental methods. In this study, 872 datasets with 34 features of doped oxides, extracted from the literature, were used to analyze the key features of gas-sensing reactions and understand gas-sensing mechanisms from a global perspective using a genetic algorithm-optimized artificial neural network. Shapley additive explanations were employed to determine the importance and relationships of the features.

View Article and Find Full Text PDF

Increasing microplastics pollution: An emerging vector for potentially pathogenic bacteria in the environment.

Water Res

January 2025

Leibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB), Neuglobsow 16775, Germany; Institute of Biochemistry and Biology, Potsdam University, Potsdam 14469, Germany.

Microplastics (MP), plastic particles <5 mm, are of global concern due to their worldwide distribution and potential repercussions on ecosystems and human well-being. In this study, MP were collected from the urbanized Susurluk basin in Türkiye to evaluate their vector function for bacterial biofilms, both in the wet and dry seasons. Bacterial biofilms were predominantly found on polyethylene (PE), polypropylene (PP), and polystyrene (PS), which constitute the most common MP types in the region.

View Article and Find Full Text PDF

Unpacking the green potential: How does supply chain digitalization affect corporate carbon emissions? - Evidence from supply chain innovation and application pilots in China.

J Environ Manage

January 2025

Institute of Blue and Green Development, Shandong University, Weihai, 264209, China; Faculty of Finance, City University of Macau, Macao, China. Electronic address:

The impact of supply chain digitalization (SCD) on carbon dioxide emissions is an emerging area of research, particularly in China, which is the world's largest carbon emitter. This study uses micro-level data on listed companies from 2010 to 2021 to systematically verify the impact and mechanism of SCD on corporate carbon emissions (CCE) through the difference-in-differences model. We determined that SCD can significantly reduce CCE and its implementation path involves three aspects: promoting technological innovation, reducing financing constraints, and increasing market attention.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!