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HDN-DDI: a novel framework for predicting drug-drug interactions using hierarchical molecular graphs and enhanced dual-view representation learning.
BMC Bioinformatics
January 2025
School of Computer Science and Technology, University of Science and Technology of China, 443 Huangshan Road, Hefei, 230027, China.
Background: Drug-drug interactions (DDIs) especially antagonistic ones present significant risks to patient safety, underscoring the urgent need for reliable prediction methods. Recently, substructure-based DDI prediction has garnered much attention due to the dominant influence of functional groups and substructures on drug properties. However, existing approaches face challenges regarding the insufficient interpretability of identified substructures and the isolation of chemical substructures.
View Article and Find Full Text PDFA vision model for automated frozen tuna processing.
Sci Rep
January 2025
School of Food and Pharmacy, Zhejiang Ocean University, Zhoushan, 316022, People's Republic of China.
Accurate and rapid segmentation of key parts of frozen tuna, along with precise pose estimation, is crucial for automated processing. However, challenges such as size differences and indistinct features of tuna parts, as well as the complexity of determining fish poses in multi-fish scenarios, hinder this process. To address these issues, this paper introduces TunaVision, a vision model based on YOLOv8 designed for automated tuna processing.
View Article and Find Full Text PDFNatural variation of CTB5 confers cold adaptation in plateau japonica rice.
Nat Commun
January 2025
Frontiers Science Center for Molecular Design Breeding, Beijing Key Laboratory of Crop Genetic Improvement, College of Agronomy and Biotechnology, China Agricultural University, Beijing, China.
During cold acclimation in high-latitude and high-altitude regions, japonica rice develops enhanced cold tolerance, but the underlying genetic basis remains unclear. Here, we identify CTB5, a homeodomain-leucine zipper (HD-Zip) transcription factor that confers cold tolerance at the booting stage in japonica rice. Four natural variations in the promoter and coding regions enhance cold response and transcriptional regulatory activity, enabling the favorable CTB5 allele to improve cold tolerance.
View Article and Find Full Text PDFGreen preparation of highly transparent nano-NH-UiO(Zr)-66/cellulose composite films with high-strength, superior flame retardant and UV to high-energy blue light shielding performance.
Int J Biol Macromol
January 2025
Engineering Research Center for Hemp and Product in Cold Region of Ministry of Education, School of Light Industry and Textile, Qiqihar University, Qiqihar 161006, PR China. Electronic address:
From the perspective of sustainable development and practical applications, there is a significant demand for the design of advanced cellulose-based film materials with superior mechanical, optical, and functional properties utilizing environmentally friendly strategies. Herein, biodegradable, mechanically robust and flame-retardant cellulose films with adjustable optical performance were successfully fabricated by in situ synthesis of NH-UiO(Zr)-66 via a DMF-free green process at room temperature. The results indicate that the introduction of NH-UiO(Zr)-66 enables films to realize a desirable flame retardancy (the limiting oxygen index (LOI) increased significantly from 19.
View Article and Find Full Text PDFThe synergistic roles of MsRCI2B and MsRCI2E in the regulation of ion balance and ROS homeostasis in alfalfa under salt stress.
Int J Biol Macromol
January 2025
College of Life Science, Northeast Agricultural University, Harbin 150030, China. Electronic address:
Under salt stress, plasma membrane proteins regulate ion homeostasis and the balance between reactive oxygen species (ROS). In this study, we investigated the functions of two small membrane proteins-MsRCI2B (tailless) and MsRCI2E (tailed)-encoded by the RCI2 (Rare Cold Inducible 2) gene family in Medicago sativa (alfalfa). We identified the distinct subcellular localization and expression patterns of these proteins under salt stress.
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