Complete chloroplast and mitochondrial genomes of Kindb. (Ditrichaceae, Bryophyta).

Mitochondrial DNA B Resour

Miyajima Natural Botanical Garden, Graduate School of Integrated Sciences for Life, Hiroshima University, Hiroshima, Japan.

Published: March 2023

The moss family Pottiaceae is one of the most diverse lineages of the subclass Dicranidae (haplolepideous mosses). Nevertheless, the phylogenetic relationships of Pottiaceae with other Dicranidae families remain unclear. To better understand the ancestral genomic structure and evolution of the Pottiaceae, herein, we present the chloroplast and mitochondrial genomes of (Ditrichaceae, Bryophyta). The chloroplast genome is 124,628 bp long and displayed a circular structure composed of a large single-copy region, a small single-copy region, and a pair of inverted repeats. It has 118 genes, including 82 protein-coding genes, 32 tRNA genes, and four rRNA genes. The mitochondrial genome is 106,246 bp long and has a circular structure. It contains 67 genes, including 40 protein-coding genes, 24 tRNA genes, and three rRNA genes. Phylogenetic trees based on the coding sequences strongly support the sister relationship of with all Pottiaceous accessions, and the dextrosely arranged operculum cells suggest its affinity for Pottiaceae. This study also demonstrates that long-read sequencing employing the Nanopore platform facilitates the repair of unassembled or misassembled organellar genomic regions.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10013369PMC
http://dx.doi.org/10.1080/23802359.2023.2185465DOI Listing

Publication Analysis

Top Keywords

chloroplast mitochondrial
8
mitochondrial genomes
8
ditrichaceae bryophyta
8
circular structure
8
single-copy region
8
genes
8
genes including
8
including protein-coding
8
protein-coding genes
8
genes trna
8

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!