The complete mitochondrial genome of a wild-collected (Solieriaceae, Rhodophyta).

Mitochondrial DNA B Resour

The Marine Science Institute, College of Science, University of the Philippines, Diliman, Quezon City, Philippines.

Published: March 2023

is a red seaweed farmed primarily for its carrageenan, a polysaccharide important in the food and pharmaceutical industries. Among the commercially cultivated species, only has no mitogenome data available. Here, we assembled the mitochondrial genome of from next-generation sequencing data. The circular mitogenome consisted of 25,250 base pairs (bp) with a GC content of 30.25%. These values were comparable to previously sequenced solieriacean mitogenomes. Structural features, such as the stem-loop and hairpin, which were previously reported in other rhodophytes mitochondrial DNA, were also identified. The annotated genes (24 protein-coding genes, 24 tRNA genes, and 2 rRNA genes) were arranged in an order similar to the other available solieriacean mitogenomes. Lastly, phylogenetic analysis using 23 predicted protein domains showed the sister relationship of with other species.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10013388PMC
http://dx.doi.org/10.1080/23802359.2023.2183728DOI Listing

Publication Analysis

Top Keywords

mitochondrial genome
8
solieriacean mitogenomes
8
complete mitochondrial
4
genome wild-collected
4
wild-collected solieriaceae
4
solieriaceae rhodophyta
4
rhodophyta red
4
red seaweed
4
seaweed farmed
4
farmed carrageenan
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!