Electronic Descriptors for Supervised Spectroscopic Predictions.

J Chem Theory Comput

Nano-Bio Spectroscopy Group, Departamento de Polímeros y Materiales Avanzados: Fisica, Química y Tecnología, Universidad del País Vasco UPV/EHU, 20018 San Sebastián, Spain.

Published: March 2023

Spectroscopic properties of molecules hold great importance for the description of the molecular response under the effect of UV/vis electromagnetic radiation. Computationally expensive (e.g., MultiConfigurational SCF, Coupled Cluster) or TDDFT methods are commonly used by the quantum chemistry community to compute these properties. In this work, we propose a (supervised) Machine Learning approach to model the absorption spectra of organic molecules. Several supervised ML methods have been tested such as Kernel Ridge Regression (KRR), Multiperceptron Neural Networs (MLP), and Convolutional Neural Networks. [Ramakrishnan et al. 2015, 143, 084111. Ghosh et al. 2019, 6, 1801367.] The use of only geometrical-atomic number descriptors (e.g., Coulomb Matrix) proved to be insufficient for an accurate training. [Ramakrishnan et al. 2015, 143, 084111.] Inspired by the TDDFT theory, we propose to use a set of electronic descriptors obtained from low-cost DFT methods: orbital energy differences (Δϵ = ϵ - ϵ), transition dipole moment between occupied and unoccupied Kohn-Sham orbitals (⟨ϕ||ϕ⟩), and when relevant, charge-transfer character of monoexcitations (). We demonstrate that with these electronic descriptors and the use of Neural Networks we can predict not only a density of excited states but also get a very good estimation of the absorption spectrum and charge-transfer character of the electronic excited states, reaching results close to chemical accuracy (∼2 kcal/mol or ∼0.1 eV).

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC10061681PMC
http://dx.doi.org/10.1021/acs.jctc.2c01039DOI Listing

Publication Analysis

Top Keywords

electronic descriptors
12
neural networks
8
[ramakrishnan 2015
8
2015 143
8
charge-transfer character
8
excited states
8
electronic
4
descriptors supervised
4
supervised spectroscopic
4
spectroscopic predictions
4

Similar Publications

Identification of characteristic flavor compounds in steamed and baked Hu sheep mutton.

Food Res Int

February 2025

College of Food Science and Technology, Zhejiang University of Technology, Hangzhou 310014, China. Electronic address:

The advancement in heat treatment technology has spurred the innovation of various smart cooking appliances, including the steam roaster. Consequently, the technique of synchronized steaming and baking has emerged as a novel form of thermal processing. Therefore, the effects of baking, steaming, steaming-baking heating modes on the flavor of Hu sheep mutton were evaluated.

View Article and Find Full Text PDF

Background: This study aimed to evaluate the service quality in Iranian hospitals from patients' perspectives based on the SERVQUAL model.

Materials And Methods: A thorough exploration of online electronic databases, including Scopus, PubMed, Web of Science, IranMedex, and the Scientific Information Database (SID), was undertaken using keywords extracted from Medical Subject Headings such as "Quality of Health Care," "Hospital," and "Patients" spanning from the earliest available records up to August 11, 2023.

Results: In the context of 25 cross-sectional studies encompassing a collective participant pool of 8021 hospitalized patients in Iranian medical facilities, an assessment of patients' perspectives on the quality of hospital services revealed a mean perception score of 3.

View Article and Find Full Text PDF

SIRE: Scale-invariant, rotation-equivariant estimation of artery orientations using graph neural networks.

Med Image Anal

January 2025

Department of Applied Mathematics, Technical Medical Centre, University of Twente, Drienerlolaan 5, 7522 NB Enschede, The Netherlands.

The orientation of a blood vessel as visualized in 3D medical images is an important descriptor of its geometry that can be used for centerline extraction and subsequent segmentation, labeling, and visualization. Blood vessels appear at multiple scales and levels of tortuosity, and determining the exact orientation of a vessel is a challenging problem. Recent works have used 3D convolutional neural networks (CNNs) for this purpose, but CNNs are sensitive to variations in vessel size and orientation.

View Article and Find Full Text PDF

Descriptor for electro-oxidation of glycerol with high-efficiency bifunctional Cu-N single atom catalyst and coupled with hydrogen evolution/carbon dioxide reduction.

J Colloid Interface Sci

January 2025

Laboratory of Theoretical and Computational Chemistry, Institute of Theoretical Chemistry, College of Chemistry, Jilin University, Changchun 130023 China. Electronic address:

Electrochemical glycerol oxidation reaction (GOR) presents a promising approach for converting excess glycerol (GLY) into high-value-added products. However, the complex mechanism and the challenge of achieving selectivity for diverse products make GOR difficult to address in both experimental and theoretical studies. In this work, three nitrogen-doped graphene-supported copper single-atom catalysts (CuN@Gra SACs, x = 2-4) were selected as the model system due to their simple structure, excellent conductivity and high structural stability.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!