phage APunk was isolated from soil collected in Grand Rapids (MI, USA) using Gordonia terrae 3612. The genome of APunk is 59,154 bp long, has a 67.7% GC content, and contains 32 protein-coding genes. Based on its gene content similarity to actinobacteriophages, APunk is assigned to phage cluster DE4.
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http://dx.doi.org/10.1128/mra.01220-22 | DOI Listing |
Infect Drug Resist
May 2024
Department of Laboratory Medicine, Shengjing Hospital of China Medical University, Liaoning Clinical Research Center for Laboratory Medicine, Shengyang, People's Republic of China.
Background: is an opportunistic pathogen that rarely causes clinical infections. Here, we first report a case of spontaneous bacterial peritonitis in patients with hepatitis C cirrhosis caused by .
Case Presentation: A 71-year-old male patient was diagnosed with spontaneous bacteria peritonitis secondary to hepatitis C cirrhosis.
Microbiol Resour Announc
February 2024
Department of Biological Sciences, University of North Carolina at Charlotte, Charlotte, North Carolina, USA.
Phage Culver, with a siphovirus morphology, was isolated using CAG3. Culver is assigned to phage cluster CQ1 based on gene content similarity to actinobacteriophages. Notably, Culver is predicted to encode eight tRNAs, lysin A by two adjacent genes, and, unlike other CQ1 phages, two putative integrase genes.
View Article and Find Full Text PDFAntibiotics (Basel)
October 2023
Reference and Research Laboratory for Taxonomy, National Centre of Microbiology, Instituto de Salud Carlos III, Majadahonda, 28220 Madrid, Spain.
The immunosuppression conditions and the presence of medical devices in patients favor the infections. However, the features of this aerobic actinomycete have been little explored. Strains ( = 164) were characterized with 16S rDNA and A1 genes to define their phylogenetic relationships, and subjected to broth microdilution to profile the antimicrobial susceptibilities of species that caused infections in Spain during the 2005-2021 period.
View Article and Find Full Text PDFMicrobiol Resour Announc
December 2023
The Honors College, University of Maine, Orono, Maine, USA.
The genomes of lytic, cluster CT phages, Horseradish and Yummy, are 45,764 and 45,878 bp in length, respectively, and each encodes 71 protein-coding genes. The genomes are identical in sequence with the exception of a 38-bp insertion/deletion in the minor tail protein, gp26.
View Article and Find Full Text PDFMicrobiol Resour Announc
October 2023
Department of Molecular Biosciences, University of South Florida, Tampa, Florida, USA.
Secretariat and Hydrus are phages grouped into the DJ cluster that were isolated on NRRL B-16540. The phages have 75% nucleotide identity and share 73% gene content. Secretariat has a genome with 84 predicted genes, while Hydrus has 91 predicted genes and can also infect 3612.
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