Bioinformatics approaches for unveiling virus-host interactions.

Comput Struct Biotechnol J

Waseda Research Institute for Science and Engineering, Waseda University, Tokyo 169-8555, Japan.

Published: February 2023

The coronavirus disease-2019 (COVID-19) pandemic has elucidated major limitations in the capacity of medical and research institutions to appropriately manage emerging infectious diseases. We can improve our understanding of infectious diseases by unveiling virus-host interactions through host range prediction and protein-protein interaction prediction. Although many algorithms have been developed to predict virus-host interactions, numerous issues remain to be solved, and the entire network remains veiled. In this review, we comprehensively surveyed algorithms used to predict virus-host interactions. We also discuss the current challenges, such as dataset biases toward highly pathogenic viruses, and the potential solutions. The complete prediction of virus-host interactions remains difficult; however, bioinformatics can contribute to progress in research on infectious diseases and human health.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9969756PMC
http://dx.doi.org/10.1016/j.csbj.2023.02.044DOI Listing

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