Genomic Insights and Functional Analysis Reveal Plant Growth Promotion Traits of G78.

Genes (Basel)

Institute of Agricultural Resources and Environment, Guangdong Academy of Agricultural Sciences, Key Laboratory of Plant Nutrition and Fertilizer in South Region, Ministry of Agriculture, Guangdong Key Laboratory of Nutrient Cycling and Farmland Conservation, Guangdong Engineering Research Center of Soil Microbes and Cultivated Land Conservation, Guangzhou 510640, China.

Published: February 2023

has widely been reported as a plant growth-promoting rhizobacteria (PGPR). However, the important genomic insights into plant growth promotion in this species remain undescribed. In this study, the genome of G78 was sequenced using Illumina NovaSeq PE150. It contains 8,576,872 bp with a GC content of 58.5%, and was taxonomically characterized. Additionally, a total of 7337 genes with 143 tRNAs, 41 rRNAs, and 5 ncRNAs were identified. This strain can prohibit the growth of the plant pathogen, but also has the capability to form biofilm, solubilize phosphate, and produce IAA. Twenty-six gene clusters encoding secondary metabolites were identified, and the genotypic characterization indirectly proved its resistant ability to ampicillin, bacitracin, polymyxin and chloramphenicol. The putative exopolysaccharide biosynthesis and biofilm formation gene clusters were explored. According to the genetic features, the potential monosaccharides of its exopolysaccharides for G78 may include glucose, mannose, galactose, fucose, that can probably be acetylated and pyruvated. Conservation of the compared with other 40 species suggests that Pel may be specific biofilm matrix component in . Several genes relevant to plant growth-promoting traits, i.e., IAA production and phosphate solubilization are well conserved compared with other 40 other strains. The current study can benefit for understanding the plant growth-promoting traits of as well as its potential application in agriculture as PGPR.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9956331PMC
http://dx.doi.org/10.3390/genes14020392DOI Listing

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