Microbial Genomics: Innovative Targets and Mechanisms.

Antibiotics (Basel)

Health Sciences Division, Abu Dhabi Women's College, Higher Colleges of Technology, Abu Dhabi 41012, United Arab Emirates.

Published: January 2023

Multidrug resistance (MDR) has become an increasing threat to global health because bacteria can develop resistance to antibiotics over time. Scientists worldwide are searching for new approaches that go beyond traditional antibiotic discovery and development pipelines. Advances in genomics, however, opened up an unexplored therapeutic opportunity for the discovery of new antibacterial agents. Genomic approaches have been used to discover several novel antibiotics that target critical processes for bacterial growth and survival, including histidine kinases (HKs), LpxC, FabI, peptide deformylase (PDF), and aminoacyl-tRNA synthetases (AaRS). In this review, we will discuss the use of microbial genomics in the search for innovative and promising drug targets as well as the mechanisms of action for novel antimicrobial agents. We will also discuss future directions on how the utilization of the microbial genomics approach could improve the odds of antibiotic development having a more successful outcome.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9951906PMC
http://dx.doi.org/10.3390/antibiotics12020190DOI Listing

Publication Analysis

Top Keywords

microbial genomics
12
will discuss
8
genomics innovative
4
innovative targets
4
targets mechanisms
4
mechanisms multidrug
4
multidrug resistance
4
resistance mdr
4
mdr increasing
4
increasing threat
4

Similar Publications

A diverse array of micro-organisms can be found on food, including those that are pathogenic or resistant to antimicrobial drugs. Metagenomics involves extracting and sequencing the DNA of all micro-organisms on a sample, and here, we used a combination of culture and culture-independent approaches to investigate the microbial ecology of food to assess the potential application of metagenomics for the microbial surveillance of food. We cultured common foodborne pathogens and other organisms including , spp.

View Article and Find Full Text PDF

Enterobacter asburiae (E. asburiae) is a gram-negative rod-shaped bacterium which has emerging significance as an opportunistic pathogen having high virulence pattern and drug resistant properties. In this study, we present the detailed analysis of the whole genome sequence of a multidrug-resistant (MDR) E.

View Article and Find Full Text PDF
Article Synopsis
  • Chickpeas and apricots are economically significant crops that suffer from severe fungal infections, traditionally managed with chemical fungicides that pose health and environmental risks.
  • Myco-synthesized (from fungi) and bacteria-synthesized zinc oxide (ZnO) nanoparticles were compared for their antifungal effectiveness against specific pathogens affecting these crops.
  • Results showed that myco-synthesized ZnO nanoparticles exhibited better antifungal properties at lower concentrations, highlighting the need for further research to enhance their application in agriculture as sustainable alternatives to chemical fungicides.
View Article and Find Full Text PDF

The giant genome of lily provides insights into the hybridization of cultivated lilies.

Nat Commun

January 2025

Zhejiang Key Laboratory of Horticultural Crop Quality Improvement, Zhejiang University, Hangzhou, China.

Lilies are economically important monocots known for their ornamental flowers, bulbs, and large genomes. The absence of their genomic information has impeded evolutionary studies and genome-based breeding efforts. Here, we present reference genomes for Lilium sargentiae (lily, 35.

View Article and Find Full Text PDF

Assessing live microbial therapeutic transmission.

Gut Microbes

December 2025

Precision Immunology Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.

The development of fecal microbiota transplantation and defined live biotherapeutic products for the treatment of human disease has been an empirically driven process yielding a notable success of approved drugs for the treatment of recurrent infection. Assessing the potential of this therapeutic modality in other indications with mixed clinical results would benefit from consistent quantitative frameworks to characterize drug potency and composition and to assess the impact of dose and composition on the frequency and duration of strain engraftment. Monitoring these drug properties and engraftment outcomes would help identify minimally sufficient sets of microbial strains to treat disease and provide insights into the intersection between microbial function and host physiology.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!