The Variations' in Genes Encoding TIM-3 and Its Ligand, Galectin-9, Influence on ccRCC Risk and Prognosis.

Int J Mol Sci

Laboratory of Genetics and Epigenetics of Human Diseases, Department of Experimental Therapy, Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences, 53-114 Wrocław, Poland.

Published: January 2023

Renal cell cancer is the most common type of kidney cancer in adults, and clear cell renal cell carcinoma (ccRCC) is the most diagnosed type. T cell immunoglobulin and mucin-domain-containing-3 (TIM-3) belongs to immunological checkpoints that are key regulators of the immune response. One of the known TIM-3 ligands is galectin-9 (). A limited number of studies have shown an association between polymorphisms and cancer risk in the Asian population; however, there is no study on the role of polymorphisms in cancer. The present study aimed to analyze the influence of and polymorphisms on susceptibility to ccRCC and patient overall survival (OS), with over ten years of observations. Using TaqMan probes, ARMS-PCR, and RFPL-PCR, we genotyped two single-nucleotide polymorphisms (SNPs): rs1036199 and rs10057302, and four SNPs: rs361497, rs3751093, rs4239242, and rs4794976. We found that the presence of the rs10057302 A allele (AC + AA genotypes) as well as the rs4794976 T allele (GT + TT genotypes) decreased susceptibility to ccRCC by two-fold compared to corresponding homozygotes. A subgroup analysis showed the association of some SNPs with clinical features. Moreover, rs1036199 significantly influenced OS. Our results indicate that variations within and genes are associated with ccRCC risk and OS.

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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9917084PMC
http://dx.doi.org/10.3390/ijms24032042DOI Listing

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