Purpose: This study aims to investigate the impact of aggregation methods used for the generation of texture features on their robustness of nasopharyngeal carcinoma (NPC) based on F-FDG PET/CT images.
Methods: 128 NPC patients were enrolled and 95 texture features were extracted for each patient including six feature families under different aggregation methods. For GLCM and GLRLM features, six aggregation methods were considered. For GLSZM, GLDZM, NGTDM and NGLDM features, three aggregation methods were considered. The robustness of the features affected by aggregation methods was assessed by the pair-wise intra-class correlation coefficient (ICC). Furthermore, the effects of discretization and partial volume correction (PVC) on the percent of ICC categories of all texture features were evaluated by overall ICC instead of the pair-wise ICC.
Results: There were 12 features with excellent pair-wise ICCs varying aggregation methods, namely joint average, sum average, autocorrelation, long run emphasis, high grey level run emphasis, short run high grey level emphasis, long run high grey level emphasis, run length variance, SZM high grey level emphasis, DZM high grey level emphasis, high grey level count emphasis and dependence count percentage. For GLCM and GLRLM features, 19/25 and 14/16 features showed excellent pair-wise ICCs varying aggregation methods (averaged and merged) on the same dimensional features (2D, 2.5D or 3D). Different discretization levels and partial volume corrections lead to consistent robustness of textural features affected by aggregation methods.
Conclusion: Different dimensional features with the same aggregation methods showed worse robustness compared with the same dimensional features with different aggregation methods. Different discretization levels and PVC algorithms had a negligible effect on the percent of ICC categories of all texture features.
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http://dx.doi.org/10.3390/cancers15030932 | DOI Listing |
JMIR Cancer
January 2025
Division of Radiology and Biomedical Engineering, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan.
Background: The application of natural language processing in medicine has increased significantly, including tasks such as information extraction and classification. Natural language processing plays a crucial role in structuring free-form radiology reports, facilitating the interpretation of textual content, and enhancing data utility through clustering techniques. Clustering allows for the identification of similar lesions and disease patterns across a broad dataset, making it useful for aggregating information and discovering new insights in medical imaging.
View Article and Find Full Text PDFMalar J
January 2025
PATH, 2201 Westlake Ave Ste 200, Seattle, WA, 98121, USA.
Background: The World Health Organization conditionally recommends reactive drug administration to reduce malaria transmission in settings approaching elimination. However, few studies have evaluated the impact of reactive focal drug administration (rFDA) in sub-Saharan Africa, and none have evaluated it under programmatic conditions. In 2016, Senegal's national malaria control programme introduced rFDA, the presumptive treatment of compound members of a person with confirmed malaria, and reactive mass focal drug administration (rMFDA), an expanded effort including neighbouring compounds during an outbreak, in 10 low transmission districts in the north of the country.
View Article and Find Full Text PDFBMC Health Serv Res
January 2025
Department of Health Policy and Management, School of Public Health and Safety, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Background: Family physician program is one of the effective reforms of the health system in Iran, but despite the implementation of this program in rural areas and the passage of ten years since its implementation in two provinces of Fars and Mazandaran, its implementation has faced problems. The aim of this study is to identify and prioritize implementation solutions related to the challenges of the family physician program in Iran.
Methods: This is a qualitative study using semi-structured interviews with 22 snowball-sampled experts and managers of basic health insurers to extract problems and executive solutions through coding and data analysis using Atlas Ti software and content analysis in the first stage.
Cell Death Discov
January 2025
Cutaneous Biology Research Center, Massachusetts General Hospital and Harvard Medical School, Charlestown, MA, 02129, USA.
Ankyloblepharon-Ectodermal Defects-Cleft Lip/Palate (AEC) syndrome is a rare genetic disorder caused by mutations in the TP63 gene, which encodes a transcription factor essential for epidermal gene expression. A key feature of AEC syndrome is chronic skin erosion, for which no effective treatment currently exists. Our previous studies demonstrated that mutations associated with AEC syndrome lead to p63 protein misfolding and aggregation, exerting a dominant-negative effect.
View Article and Find Full Text PDFBMJ Open
January 2025
Centre for Cancer Screening, Prevention and Early Diagnosis, Wolfson Institute of Population Health, Barts and The London School of Medicine and Dentistry, Queen Mary University of London, London, UK.
Background: Worldwide, lung cancer (LC) is the second most frequent cancer and the leading cause of cancer related mortality. Low-dose CT (LDCT) screening reduced LC mortality by 20-24% in randomised trials of high-risk populations. A significant proportion of those screened have nodules detected that are found to be benign.
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