NF-YB family transcription factors in : Structure, phylogeny, and expression analysis in biotic and abiotic stresses.

Front Microbiol

Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India.

Published: January 2023

AI Article Synopsis

  • NF-Y transcription factors are conserved protein complexes made up of three subunits (NF-YA, NF-YB, and NF-YC) that bind to specific gene promoter regions and play crucial roles in gene regulation across eukaryotes.
  • Researchers identified ten members of the NF-YB family and analyzed their expression profiles under various stress conditions (like drought, cold, and diseases) using microarray data, revealing their involvement in important cellular processes.
  • The study highlights the regulatory roles of NF-YB TFs in plant development and defense mechanisms, suggesting potential applications in developing transgenic plants for improved traits.

Article Abstract

Nuclear factor-Y (NF-Y) transcription factors (TFs) are conserved heterotrimeric complexes present and widespread across eukaryotes. Three main subunits make up the structural and functional aspect of the NF-Y TFs: NF-YA, NF-YB and NF-YC, which bind to the conserved CCAAT- box of the promoter region of specific genes, while also interacting with each other, thereby forming myriad combinations. The NF-YBs are expressed differentially in various tissues and plant development stages, likely impacting many of the cellular processes constitutively and under stress conditions. In this study, ten members of NF-YB family from were identified and expression profiles were mined from microarray data under different biotic and abiotic conditions, revealing key insights into the involvement of this class of proteins in the cellular and biological processes in . Analysis of -acting regulatory elements (CAREs) indicated the presence of abiotic and biotic stress-related transcription factor binding sites (TFBs), shedding light on the multifaceted roles of these TFs. Microarray data analysis inferred distinct patterns of expression in various tissues under differing treatments such as drought, cold and heat stress as well as bacterial, fungal, and viral stress, indicating their likelihood of having an expansive range of regulatory functions under native and stressed conditions; while quantitative real-time PCR (qRT-PCR) based expression analysis revealed that these TFs get real-time-modulated in a stress dependent manner. This study, overall, provides an understanding of the AtNF-YB family of TFs in their regulation and participation in various morphogenetic and defense- related pathways and can provide insights for development of transgenic plants for trait dependent studies.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9887194PMC
http://dx.doi.org/10.3389/fmicb.2022.1067427DOI Listing

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