AI Article Synopsis

  • - This paper supplements a research study on bacterial fish pathogens in marine salmon post-smolt rearing by providing additional microbiome data from a recirculating aquaculture system (RAS).
  • - It includes a fasta file of complete 16S rRNA sequences from fish pathogenic microbes, available in the "Fish Pathogen Database" on Mendeley.
  • - The paper also features a link to a CSV file with Pearson correlation data related to the microbiome, along with a methodology description and a table summarizing correlation findings for fish pathogen-relatives.

Article Abstract

This paper provides supplementary data to the research paper ''Presence and habitats of bacterial fish pathogen relatives in a marine salmon post-smolt RAS" [1]. Here, environmental samples from a marine recirculating aquaculture system (RAS) were subjected to microbiome studies. This data article adds value to the research article by providing open access to data files that increased information retrieval from the 16S rRNA sequence library. A fasta file of full-length 16S rRNA sequences from fish pathogenic microbes was deposited in the Mendeley data repository, a collection named "Fish Pathogen Database". Alignment of this database against the short sequences in the 16S rRNA library revealed the fish pathogen-relatives. Furthermore, a link to a CSV file containing Pearson correlation data was provided, an analysis based on the relative abundance information of all operational taxonomic units defined in the microbiome dataset. Included also, the methodological description of the Pearson correlation analysis, as well as a table where correlation data for the defined fish pathogen-relatives was retrieved from the large data file (Table 1).

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9849859PMC
http://dx.doi.org/10.1016/j.dib.2022.108846DOI Listing

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