Satellitome Analysis on Genome and Inferences about the satDNAs Evolution on Some Talpidae.

Genes (Basel)

Departamento de Biología Experimental, Área de Genética, Universidad de Jaén, Paraje de las Lagunillas s/n, 23071 Jaén, Spain.

Published: December 2022

AI Article Synopsis

  • A new species within the genus has been identified, focusing on cytogenetic data for its nuclear genome, and its satellitome comprises 16 families of satellite DNA that make up 1.24% of the genome.
  • The most abundant family, TaquSat1-183, accounts for 0.558% of the genome, and overall satellite DNA shows an average A + T content of 50.43% with a median monomer length of 289.24 bp.
  • Analysis indicates variation in clusterization and preservation of these satDNAs among species, suggesting that they play a significant role in chromosomal differences and contribute to our understanding of mammalian satellitome evolution.

Article Abstract

In the genus a new species, named , has been recently described. Only cytogenetic data are available for the nuclear genome of this species. In this work, we characterize the satellitome of the genome that presents 16 different families, including telomeric sequences, and they represent 1.24% of the genome. The first satellite DNA family (TaquSat1-183) represents 0.558%, and six more abundant families, including TaquSat1-183, comprise 1.13%, while the remaining 11 sat-DNAs represent only 0.11%. The average A + T content of the SatDNA families was 50.43% and the median monomer length was 289.24 bp. The analysis of these SatDNAs indicated that they have different grades of clusterization, homogenization, and degeneration. Most of the satDNA families are present in the genomes of the other species analyzed, while in the genomes of other more distant species of Talpidae, only some of them are present, in accordance with the library hypothesis. Moreover, chromosomal localization by FISH revealed that some satDNAs are localized preferentially on centromeric and non-centromeric heterochromatin in and also in the sister species karyotype. The differences observed between and the close relative and suggested that the satellitome is a very dynamic component of the genomes and that the satDNAs could be responsible for chromosomal differences between the species. Finally, in a broad context, these data contribute to the understanding of the evolution of satellitomes on mammals.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9859602PMC
http://dx.doi.org/10.3390/genes14010117DOI Listing

Publication Analysis

Top Keywords

families including
8
satdna families
8
species
6
satellitome analysis
4
genome
4
analysis genome
4
genome inferences
4
satdnas
4
inferences satdnas
4
satdnas evolution
4

Similar Publications

Cannabis inflorescences represent an important source of many high-value bioactive specialized metabolites, among which the family of terpenes or terpenoids that are the largest classes of natural products known. Besides their biological activities either alone or synergistic with other terpenoids and/or cannabinoids, they are responsible for their distinctive flavour. In this study, we exploited the separation power and identification capabilities of comprehensive two-dimensional gas chromatography coupled to mass spectrometry (GC×GC-MS) for the profiling of terpenes and terpenoids in cannabis inflorescences.

View Article and Find Full Text PDF

Evidence on the effectiveness and implementation of mental health and psychosocial support (MHPSS) interventions for men in humanitarian settings is limited. Moreover, engagement and retention of men in such interventions has been challenging. Adaptations may therefore be required to improve the appropriateness and acceptability of these interventions for men.

View Article and Find Full Text PDF

One of the most popular instruments used to assess perceived social support is the Multidimensional Scale of Perceived Social Support (MSPSS). Although the original structure of the MSPSS was defined to include three specific factors (significant others, friends and family), studies in the literature propose different factor solutions. In this study, we addressed the controversial factor structure of the MSPSS using a meta-analytic confirmatory factor analysis approach.

View Article and Find Full Text PDF

Introduction: When a child has a disability, their families face significant challenges that also impact parents' and siblings' mental health and adjustment. We examined the potential bidirectional relationships between parental mental health and sibling mental health and adjustment in families of children with a disability.

Methods: We utilized baseline and 12-month follow-up data from a randomized controlled trial of a brief intervention designed to enhance parent-sibling communication in families of children with a disability.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!