Detection of the pathogenic fungus in the soil-rearing environment based on nucleic acid targets.

Can J Microbiol

State Key Laboratory of Silkworm Genome Biology, Chongqing Key Laboratory of Microsporidia Infection and Prevention, Southwest University, Chongqing 400715, China.

Published: March 2023

an entomopathogenic fungus, infects and leads to high mortality of larvae, which die soon after the infection of , usually before the colonization of owing to competitive inhibition and fruiting body formation. Therefore, monitoring in the cultivation environment is critical for minimizing the infection-induced losses. In this study, we initially designed a PCR primer pair (Tar-1F/Tar-1R) through open reading frame prediction and homology comparison of the genome sequence. This primer pair can detect both and . To further distinguish, primers (ITS5-172/ITS4-95) were then designed to selectively amplify the large ribosomal subunit sequences in the genome. All these primers were applied in combination for detection of in soil samples. The sensitivity reached a detection limit of 1 × 10 spores/g soil. In addition, these primers can detect the presence of in dead larval samples. This newly established rapid detection method provides important information for control during cultivation.

Download full-text PDF

Source
http://dx.doi.org/10.1139/cjm-2022-0165DOI Listing

Publication Analysis

Top Keywords

primer pair
8
detection
4
detection pathogenic
4
pathogenic fungus
4
fungus soil-rearing
4
soil-rearing environment
4
environment based
4
based nucleic
4
nucleic acid
4
acid targets
4

Similar Publications

Sexual dimorphism in lung transcriptomic adaptations in fetal alcohol spectrum disorders.

Respir Res

January 2025

Department of Obstetrics and Gynecology, C.S. Mott Center for Human Growth and Development, School of Medicine, Wayne State University, 275 E Hancock St, Rm 195, Detroit, MI, 48201, USA.

Current fetal alcohol spectrum disorders (FASD) studies primarily focus on alcohol's actions on the fetal brain although respiratory infections are a leading cause of morbidity/mortality in newborns. The limited studies examining the pulmonary adaptations in FASD demonstrate decreased surfactant protein A and alveolar macrophage phagocytosis, impaired differentiation, and increased risk of Group B streptococcal pneumonia with no study examining sexual dimorphism in adaptations. We hypothesized that developmental alcohol exposure in pregnancy will lead to sexually dimorphic fetal lung morphological and immune adaptations.

View Article and Find Full Text PDF

(Miq.) Pax, a highly valued Chinese medicinal plant, is experiencing a notable decline in yield and quality due to viral diseases, particularly caused those by TuMV and BBWV2. Currently, the absence of a quantitative detection method for these viruses in impedes the accurate diagnosis.

View Article and Find Full Text PDF

Gamma-aminobutyric acid (GABA) has been attributed to health-promoting properties and has received attention from the food industry as an attractive bioactive compound for the development of functional foods. Some lactic acid bacteria (LAB) produce GABA through a glutamate decarboxylase encoded by B and a glutamate/GABA antiporter encoded by C. In this study, we develop a molecular screening method based on a polymerase chain reaction able to detect those genes in different LAB species through the use of novel multispecies primers.

View Article and Find Full Text PDF

Introduction: Chinese kale ( var. alboglabra), is an annual herb belonging to the Brassica genus of Cruciferae, and is one of the famous specialty vegetables of southern China. Some varieties show bright green leaf (BGL) traits and have better commerciality.

View Article and Find Full Text PDF

Genetic Diversity of Sangihe Nutmeg ( Houtt.) Based on Morphological and ISSR Markers.

Scientifica (Cairo)

December 2024

Laboratory of Plant Systematics, Department of Biology, Faculty of Biology, Universitas Gadjah Mada, Sekip Utara Street, Sleman, Yogyakarta 55281, Indonesia.

Sangihe nutmeg is an important crop because of its usefulness in the pharmacology, spices and cosmetics industries. Sangihe is the oldest active subduction zone island in the Indonesia-Philippines region, where frequent tectonic earthquakes and the geographic and reproductive isolation of Sangihe nutmeg occur. This isolation results in adaptation and speciation because of increasing variability.

View Article and Find Full Text PDF

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!