Whole genome sequencing data of BASUSDA_45 isolated from soil in Bangladesh capable of degrading pesticide.

Data Brief

Department of Genetic Engineering and Biotechnology, Molecular Biology and Protein Science Laboratory (MBPSL), University of Rajshahi, Rajshahi 6205, Bangladesh.

Published: February 2023

This article reports the BASUSDA_45 strain's draft genomic sequence. The bacterium was isolated from cypermethrin pesticide contaminated soil and then the sequencing was carried out. Initially assembly of the raw sequences, trimming and quality check generates 125 contigs having N50 of 78,923. Further mapping of the contigs generated scaffolds. The genome contains 53 scaffolds with a total length of 4,295,151 bp having 62.30% GC content and N50 of 3,726,017. Annotation using Prokaryotic Genome Annotation Pipeline (PGAP) reveals 4181 genes among which 4096 were coding sequences, 76 tRNAs, 3 rRNAs, 4 noncoding RNAs. The raw sequence reads and annotated genome were uploaded to NCBI's Bioproject repository with the accession number PRJNA686506.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9823114PMC
http://dx.doi.org/10.1016/j.dib.2022.108853DOI Listing

Publication Analysis

Top Keywords

genome
4
genome sequencing
4
sequencing data
4
data basusda_45
4
basusda_45 isolated
4
isolated soil
4
soil bangladesh
4
bangladesh capable
4
capable degrading
4
degrading pesticide
4

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!