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Transcriptome-Based Selection and Validation of Reference Genes for Gene Expression in Goji Fruit Fly ( Becker) under Developmental Stages and Five Abiotic Stresses. | LitMetric

Goji fruit fly, , is a major pest on the well-known medicinal plant . Dissecting molecular mechanisms of infestation and host selection of will contribute to the determination of best management practices for pest fly control. Gene expression normalization by Real-time quantitative PCR (qPCR) requires the selection and validation of appropriate reference genes (RGs). Hence, 15 candidate RGs were selected from transcriptome data of . Their expression stability was evaluated with five algorithms (∆Ct, Normfinder, GeNorm, BestKeeper, and RefFinder) for sample types differing in the developmental stage, sex, tissue type, and in response to five different abiotic stresses. Our results indicated that the RGs + for sex, + for tissue type, + for developmental stages along with odor stimulation, color induction, and starvation-refeeding stresses, + under insecticide stress, + under temperature stress, respectively, were selected as the most suitable RGs for qPCR normalization. Overall, and were the two most stable RGs in all conditions, while and were the least stable RGs. The corresponding suitable RGs and one unstable RG were used to normalize a target odorant-binding protein OBP56a gene in male and female antennae, different tissues, and under odor stimulation. The results of expression were consistent with transcriptome data. Our study is the first research on the most stable RGs selection in , which will facilitate further studies on the mechanisms of host selection and insecticide resistance in .

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9820723PMC
http://dx.doi.org/10.3390/ijms24010451DOI Listing

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