AI Article Synopsis

  • The study aims to assess how genes related to pyroptosis can predict outcomes and immune responses in bladder cancer patients.
  • Researchers utilized data from databases like TCGA and GEO to create a risk model through LASSO analysis, identifying eight key genes affecting survival.
  • Results showed that patients classified in the high-risk group (HR) faced worse survival rates, had higher rates of TP53 mutations, and were more likely to experience immune escape compared to the low-risk group (LR).

Article Abstract

Objective: To evaluate the predictive value of pyroptosis-related genes for the prognosis and immune escape of bladder cancer (BC).

Methods: Transcriptomic and single nucleotide polymorphisms (SNPs) data were downloaded from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO) portal. Least absolute shrinkage and selection operator (LASSO) analysis was carried out to construct a prognostic risk model for BC patients.

Results: Based on the expression of 50 pyroptosis-related genes, BC patients from TCGA database were divided into two clusters, which showed significant differences in overall survival and disease specific survival. Furthermore, we intersected the differentially expressed genes between these two clusters with those identified from the GSE13507 dataset and finally identified eight survival related genes, which was used to construct a prognostic risk model by LASSO Cox regression. According to the model, the high-risk (HR) group was closely associated with poor survival or the advanced pathological stage of BC. In addition, the HR group was mainly enriched in cell cycle and immune-related pathways and had a higher TP53 mutation rate than the low-risk (LR) group. Furthermore, these two risk groups were significantly related to immune cell composition, immune cell infiltration, and immune response. Importantly, a higher expression of PD-1, PD-L1, and CTLA4 as well as higher immune exclusion scores were found in the HR group, suggesting a higher possibility of immune escape.

Conclusion: Our studies revealed the key role of pyroptosis in predicting the prognosis, TP53 mutation, and immune escape of patients with BC.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9730090PMC

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