The increased availability of environmental data with depth deriving from remote-sensing-based datasets permits more comprehensive modelling of the distribution of marine ecosystems in space and time. This research tests the potential of such objective modelling of marine ecosystems in four dimensions, spatial and temporal, to provide projections of how climate change may affect biodiversity, including aquaculture. This approach could be replicated for any regional seas. The Bohai Sea, Yellow Sea, and East China Sea (BYECS) are marginal seas in the Northwest Pacific bounded by China, Korea, and Japan. Despite providing important ecological and economic services, their ecological conditions and ecosystems distribution have not yet been systematically mapped. This analysis used 13 marine environmental variables, measured on a three-dimensional and monthly basis during 1993-2019, to classify and map the BYECS region by k-means clustering using cosine similarity as distance function. There were 13 distinct areas identified that fit the definition of "ecosystems" that is, enduring regions demarcated by environmental characteristics. Of these 13 ecosystems, the Yellow Sea Cold Water (YSCW) Ecosystem is significant in relation to seasonal species composition and the newly developing deep-sea salmon caging aquaculture in the region. Projections of the potential size of this water mass under various climate-change scenarios based on analysis using the Non-Parametric Probabilistic Ecological Niche (NPPEN) model show that its volume may decrease 31 %-66 % in the future. Such a decrease would have impacts on the seasonal species' abundances in the BYECS marginal sea region and threaten the deep-sea cold-water salmon farming.
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http://dx.doi.org/10.1016/j.scitotenv.2022.160505 | DOI Listing |
J Phycol
January 2025
Oregon Institute of Marine Biology, University of Oregon, Charleston, Oregon, USA.
Sea ice can profoundly influence photosynthetic organisms by altering subsurface irradiance, but it is susceptible to changes in the climate. The patterns and timing of sea ice cover can vary on a monthly to annual timescale in small sub-regions of the Western Antarctic Peninsula (WAP). During the latter part of the 20th century, sea ice coverage significantly decreased in the WAP, a trend that aligns with warming in this area.
View Article and Find Full Text PDFAnn N Y Acad Sci
January 2025
NewClimate Institute, Cologne, Germany.
Globally, more than 100 countries have adopted net-zero targets. Most studies agree on how this increases the chance of keeping end-of-century global warming below 2°C. However, they typically make assumptions about net-zero targets that do not capture uncertainties related to gas coverage, sector coverage, sinks, and removals.
View Article and Find Full Text PDFOrv Hetil
January 2025
1 Semmelweis Egyetem, Általános Orvostudományi Kar, Városmajori Szív- és Érgyógyászati Klinika, Kísérletes Kardiológiai és Sebészeti Műtéttani Tanszék Budapest, Nagyvárad tér 4., 1089 Magyarország.
Bioinformatics
January 2025
Biocomputing Group, University of Bologna, Italy.
Motivation: The knowledge of protein stability upon residue variation is an important step for functional protein design and for understanding how protein variants can promote disease onset. Computational methods are important to complement experimental approaches and allow a fast screening of large datasets of variations.
Results: In this work we present DDGemb, a novel method combining protein language model embeddings and transformer architectures to predict protein ΔΔG upon both single- and multi-point variations.
Am J Bot
January 2025
School of Biological Sciences, Washington State University, Pullman, 99164, Washington, USA.
Premise: The movement of lineages into novel areas can promote ecological opportunity and adaptive radiation, leading to significant species diversity. Not all studies, however, have identified support for ecological opportunity associated with novel intercontinental colonizations. To gain key insights into the drivers of ecological opportunity, we tested whether intercontinental dispersals resulted in ecological opportunity using the Hydrangeaceae-Loasaceae clade, which has numerous centers of diversity across the globe.
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