versus : Separation of Ecological Niches and Consequences of Cyanobacterial Dominance in Freshwater.

Cyanobacteria dominate lakes under diverse trophic conditions. Of these, two harmful filamentous cyanobacterial species, namely and , occupy completely different ecological niches in which they can form dense populations. In the present study, we investigated the effects of environmental conditions on the growth and vertical distribution of these species in lakes of different trophic statuses. Moreover, we underscored certain inconveniences in the assessment of the ecological status of lakes according to the European Union Water Framework Directive. The highest biomass of was recorded in eutrophic lake at a depth of 0.5-1 m, under high light intensity. Meanwhile, the highest biomass of , at which the deep chlorophyll maximum was recorded, was observed in mesotrophic lakes at a depth of 11-12 m, often below the euphotic zone under very low light intensity. , but not , exerted a strong allelopathic effect on the diversity and biomass of phytoplankton. Moreover, both species utilised different dissolved nitrogen fractions for their growth; specifically, used ammonium nitrogen, whilst used nitrate nitrogen. Furthermore, dissolved phosphorus produced a potentially limiting effect on growth. Overall, the tested Polish PMPL, German PSI, and Estonian phytoplankton indices were indeed useful in the assessment of the ecological status of lakes, albeit limited to the eutrophic lake with a high biomass of cyanobacteria () in the upper water layers. However, problems arose in the proper assessment of lakes with a high biomass of cyanobacteria () with a deep chlorophyll maximum outside the range of the euphotic zone. In such cases, two of the tested indices, namely the Polish and German indices, allowed sample collection from the euphotic layers, which significantly affected the number of samples included in the calculation. Consequently, the correct calculation of the ecological status of the lake was uncertain. Only the Estonian index allowed for a sample collection from two to three thermal layers of water, including the bloom layer of . Hence, the Estonian index offered the best fit for calculations.