70B is a thermophile found in a geothermically active underground mine. The strain 70B belongs to the class of , order of , and family of . Strain 70B was the only type strain since the genus was discovered >10 years ago. Strain 70B was compared to strains from other genera in terms of its phenotypics, chemotaxonomics, and phylogenetics (16S rRNA gene) in previous studies. However, the genome sequence of this strain has not been described. We herein described the genome sequence of strain 70B. In total, the assembled genome of strain 70B has a size of 2,451,552 bp, contributed by 44 contigs, with a coverage of 445X, a N50 of 86,294 bp, and a GC% of 43.8. A total of 2,540 genes were encoded in the genome, including 2,431 protein-coding sequences, 46 pseudogenes, and 63 RNA genes. Through the Cluster of Orthologous Groups (COGs) analysis, a total of 2,404 protein-coding genes were functionally assigned to COGs in the genome of strain 70B. Among the members of family, strain 70B has the closest relationship to JW/SA-NV4 based on the genome-to-genome comparison indexes (i.e., ANI, dDDH, AAI, and POCP). An earlier study reported that strain 70B could produce hydrogen. We discovered genes encoding [FeFe] hydrogenase through gene mining analysis. For future research, this genome data will be used as a reference for all matters pertaining to the genus and family .
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http://dx.doi.org/10.1016/j.dib.2022.108695 | DOI Listing |
J Oral Microbiol
May 2023
Department of Microbiology, School of Dentistry, Aichi Gakuin University, Nagoya, Japan.
Background: Mfa1 fimbriae of the periodontal pathogen Porphyromonas gingivalis are responsible for biofilm formation and comprise five proteins: Mfa1-5. Two major genotypes, mfa1 and mfa1, encode major fimbrillin. The mfa1 genotype is further divided into the mfa1 and mfa1 subtypes.
View Article and Find Full Text PDFData Brief
December 2022
Malaysia Genome and Vaccine Institute, National Institutes of Biotechnology Malaysia, Jalan Bangi, 43000 Kajang, Selangor, Malaysia.
70B is a thermophile found in a geothermically active underground mine. The strain 70B belongs to the class of , order of , and family of . Strain 70B was the only type strain since the genus was discovered >10 years ago.
View Article and Find Full Text PDFInt J Mol Sci
November 2022
Department of Molecular Biology and Biotechnology, Institute of Plant Protection-National Research Institute, 20 Węgorka St, 60-318 Poznan, Poland.
We investigated gut bacteria from three insect species for the presence of plant growth properties (PGP). Out of 146 bacterial strains obtained from 20 adult specimens of Scolytidae sp., 50 specimens of Oulema melanopus, and 150 specimens of Diabrotica virgifera, we selected 11 strains displaying the following: PGP, phosphate solubility, production of cellulase, siderophore, lipase, protease, and hydrogen cyanide.
View Article and Find Full Text PDFPLoS One
November 2021
Department of Microbiology, School of Dentistry, Aichi Gakuin University, Nagoya, Japan.
Porphyromonas gingivalis, a gram-negative anaerobic bacterium, is associated with the development of periodontal disease. The genetic diversity in virulence factors, such as adhesive fimbriae, among its strains affects the bacterial pathogenicity. P.
View Article and Find Full Text PDFFront Microbiol
July 2019
Aix-Marseille Université, Université de Toulon, CNRS, IRD, MIO UM110, Marseille, France.
Rock-hosted subseafloor habitats are very challenging for life, and current knowledge about microorganisms inhabiting such lithic environments is still limited. This study explored the cultivable microbial diversity in anaerobic enrichment cultures from cores recovered during the International Ocean Discovery Program (IODP) Expedition 357 from the Atlantis Massif (Mid-Atlantic Ridge, 30°N). 16S rRNA gene survey of enrichment cultures grown at 10-25°C and pH 8.
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