Biomolecular condensates in living cells can exhibit a complex rheology, including viscoelastic and glassy behavior. This rheological behavior of condensates was suggested to regulate polymerization of cytoskeletal filaments and aggregation of amyloid fibrils. Here, we theoretically investigate how the rheological properties of condensates can control the formation of linear aggregates. To this end, we propose a kinetic theory for linear aggregation in coexisting phases, which accounts for the aggregate size distribution and the exchange of aggregates between inside and outside of condensates. The rheology of condensates is accounted in our model via aggregate mobilities that depend on aggregate size. We show that condensate rheology determines whether aggregates of all sizes or dominantly small aggregates are exchanged between condensate inside and outside on the timescale of aggregation. As a result, the ratio of aggregate numbers inside to outside of condensates differs significantly. Strikingly, we also find that weak variations in the rheological properties of condensates can lead to a switch-like change of the number of aggregates. These results suggest a possible physical mechanism for how living cells could control linear aggregation in a switch-like fashion through variations in condensate rheology.
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http://dx.doi.org/10.1016/j.bpj.2022.11.009 | DOI Listing |
ACS Omega
December 2024
Center for Integrative Petroleum Research, College of Petroleum Engineering and Geosciences, King Fahd University of Petroleum and Minerals, Dhahran 31261, Saudi Arabia.
This study reports the demulsification activity of a newly developed nonionic demulsifier (NID) via the condensation of glycolic acid ethoxylate lauryl ether with amine. The demulsification performance of the developed NID was assessed under room and moderate temperatures (25 and 60 °C), while the concentrations of NID were varied from 100 to 700 ppm at both temperatures in order to observe their oil-water separation efficiency. The demulsification mechanism was expatiated by determining the viscosity and elastic modulus of emulsion in the presence and absence of the NID.
View Article and Find Full Text PDFSoft Matter
December 2024
Dipartimento di Chimica "Ugo Schiff", Università di Firenze, Sesto Fiorentino (FI) 50019, Italy.
We investigate the link between the internal microstructure of poly(-isopropylacrylamide)-poly(ethylene glycol) methyl ether methacrylate (PNIPAM-PEGMA) microgels, their bulk moduli and the rheological response and structural arrangement in dense suspensions. The low degree of crosslinking combined with the increased hydrophilicity induced by the presence of PEGMA results in a diffuse, star-like density profile of the particle and very low values of the bulk modulus in dilute conditions, as determined by small angle neutron scattering (SANS). The ultrasoft nature of the particle is reflected in the changes of the structural arrangement in dense suspensions, which evidence a strong deswelling and a sharp rise of the bulk modulus at moderate packing fractions.
View Article and Find Full Text PDFJACS Au
November 2024
Artie McFerrin Department of Chemical Engineering, Texas A&M University, College Station, Texas 77843, United States.
Chemistry
November 2024
Laboratory of Bioorganic Chemistry and Chemical Biology, Center for Nanotechnology, Heisenbergstrasse 11, 48149, Münster, Germany.
Self-assembly of α-D nucleosides to supramolecular hydrogels is described in detail. Hydrogel formation is studied on α-D 2'-deoxyguanosine (α-dG), and the fluorescent 8-azapurine α-D nucleosides 2-amino-8-aza-2'-deoxyadenosine (α-2-NH-zA) and 8-aza-2'-deoxyisoguanosine (α-ziG). These compounds were prepared from α-D 8-aza-2'-deoxyguanosine by an activation/amination protocol followed by deamination.
View Article and Find Full Text PDFInt J Nanomedicine
November 2024
Strathclyde Institute of Pharmacy and Biomedical Sciences, University of Strathclyde, Glasgow, G4 0RE, UK.
Background: Gene therapy is a promising therapeutic approach for treating various disorders by introducing modified nucleic acids to correct cellular dysfunctions or introduce new functions. Despite significant advancements in the field, the effective delivery of nucleic acids remains a challenge, due to biological barriers and the immune system's ability to target and destroy these molecules. Due to their branched structure and ability to condense negatively charged nucleic acids, cationic dendrimers have shown potential in overcoming these challenges.
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