Identification, Classification and Characterization of LBD Transcription Factor Family Genes in .

Int J Mol Sci

Key Laboratory of Forestry Genetics & Biotechnology of Ministry of Education, Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing 210037, China.

Published: October 2022

AI Article Synopsis

  • * This study aimed to identify the LOB gene family in a significant conifer species in southern China using cell biology and bioinformatics, resulting in the discovery of 47 gene members divided into two subfamilies.
  • * Experimental analyses revealed that the expression of these LOB genes is influenced by growth hormones and abiotic stress, while localization studies showed one gene is a nuclear protein, setting the stage for further research on their physiological roles.

Article Abstract

Transcription factors (TFs) are a class of proteins that play an important regulatory role in controlling the expression of plant target genes by interacting with downstream regulatory genes. The lateral organ boundary (LOB) structural domain () genes are a family of genes encoding plant-specific transcription factors that play important roles in regulating plant growth and development, nutrient metabolism, and environmental stresses. However, the gene family has not been systematically identified in , one of the most important conifers in southern China. Therefore, in this study, we combined cell biology and bioinformatics approaches to identify the gene family of by systematic gene structure and functional evolutionary analysis. We obtained 47 gene family members, and all members can be divided into two subfamilies, (Class I and Class II). By treating the plants with abiotic stress and growth hormone, etc., under qPCR-based analysis, we found that the expression of genes was regulated by growth hormone and abiotic stress treatments, and thus this gene family in growth and development may be actively involved in plant growth and development and responses to adversity stress, etc. By subcellular localization analysis, PmLBD is a nuclear protein, and two of the genes, and , were selected for functional characterization; secondly, yeast self-activation analysis showed that , , and had no self-activating activity. This study lays the foundation for an in-depth study of the role of the gene family in other physiological activities of .

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9658656PMC
http://dx.doi.org/10.3390/ijms232113215DOI Listing

Publication Analysis

Top Keywords

gene family
20
growth development
12
family genes
8
transcription factors
8
plant growth
8
abiotic stress
8
growth hormone
8
family
7
genes
7
gene
6

Similar Publications

Want AI Summaries of new PubMed Abstracts delivered to your In-box?

Enter search terms and have AI summaries delivered each week - change queries or unsubscribe any time!