Somatic genetic variation in healthy tissue and non-cancer diseases.

Eur J Hum Genet

Genomics Core Facility, Departament de Ciències Experimentals i de la Salut, Universitat Pompeu Fabra, Parc de Recerca Biomèdica de Barcelona, 08003, Barcelona, Spain.

Published: January 2023

AI Article Synopsis

  • * Recent research is exploring somatic variants in healthy tissues and how they affect cell lineages and various organs, as well as their contributions to monogenic and complex diseases.
  • * Advancements in next-generation sequencing have improved the study of these variants, but challenges remain, necessitating ongoing development in sampling and validation methods.

Article Abstract

Somatic genetic variants have been studied for several years mostly concerning cancer, where they contribute to its origin and development. It is also clear that the somatic variants load is greater in aged individuals in comparison to younger ones, pointing to a cause/consequence of the senescence process. More recently, researchers have focused on the role of this type of variation in healthy tissue and its dynamics in cell lineages and different organs. In addition, somatic variants have been described to contribute to monogenic diseases, and the number of evidences of their role in complex disorders is also increasing. Thanks to recent advances in next-generation sequencing technologies, this type of genetic variation can be now more easily studied than in the past, although we still face some important limitations. Novel strategies for sampling, sequencing and filtering are being investigated to detect these variants, although validating them with an orthogonal approach will most likely still be needed. In this review, we aim to update our knowledge of somatic variation detection and its relation to healthy tissue and non-cancer diseases.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9823099PMC
http://dx.doi.org/10.1038/s41431-022-01213-8DOI Listing

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