Dynamic Expression of Palmitoylation Regulators across Human Organ Development and Cancers Based on Bioinformatics.

Curr Issues Mol Biol

College of Natural Resources and Environment, Northwest A&F University, Xianyang 712100, China.

Published: September 2022

Protein palmitoylation is a reversible modification process that links palmitate to cysteine residues via a reversible thioester bond. Palmitoylation exerts an important role in human organ development and tumor progression. However, a comprehensive landscape regarding the dynamic expression of palmitoylation regulators in human organ development remains unclear. In this study, we analyzed the dynamic expression of palmitoylation regulators in seven organ development and eight cancer types based on bioinformatics. We found that the expression levels of most palmitoylation regulators were altered after birth. In particular, exhibited converse expression patterns in multiple cancer types. Survival analysis showed that the poor prognosis in patients with kidney renal clear carcinoma (KIRC) is related to low expression of , and a high expression of is related to worse survival in patients with liver hepatocellular carcinoma (LIHC). Furthermore, we found that the expression of is associated with infiltration levels of some types of immune cells in the tumor microenvironment (TME), and we explored the relationship between expression and immune checkpoint (ICP) genes across 33 cancer types. In addition, gene set enrichment analysis (GSEA) results indicated that might regulate different genes to mediate the same pathway in different organs. In summary, the comprehensive analysis of palmitoylation regulators reveals their functions in human organ development and cancer, which may provide new insights for developing new tumor markers.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9600046PMC
http://dx.doi.org/10.3390/cimb44100306DOI Listing

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