Similar Publications

Selective Tautomer Production and Cryogenic Ion Spectroscopy of Radical Cations: The Uracil and Thymine Cases.

J Phys Chem A

May 2024

Centro Láser de Ciencias Moleculares, Universidad Nacional de Córdoba. Haya de la Torre y Medina Allende. Pabellón Argentina, Ciudad Universitaria, Córdoba X5000HUA, Argentina.

The vibrational and electronic spectroscopy of the radical cations of two nucleobases (NB) (uracil and thymine) was studied by cryogenic ion photodissociation spectroscopy. The radical cations have been generated from the photodissociation of NB-Ag complexes. A charge transfer process from the NB to Ag governs the deactivation mechanism, leading to the formation of the radical cation without further tautomerization.

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Carbon aggregates containing between 10 and 30 atoms preferentially arrange themselves as planar rings. To learn more about this exotic allotrope of carbon, electronic spectra are measured for even cyclo[]carbon radical cations (-) using two-color photodissociation action spectroscopy. To eliminate spectral contributions from other isomers, the target cyclo[]carbon radical cations are isomer-selected using a drift tube ion mobility spectrometer prior to spectroscopic interrogation.

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Cryogenic IR and UV spectroscopy of isomer-selected cytosine radical cation.

Phys Chem Chem Phys

October 2022

Université Paris-Saclay, CNRS, Institut des Sciences Moléculaires d'Orsay, F-91405 Orsay, France.

Oxidation of the nucleobases is of great concern for the stability of DNA strands and is considered as a source of mutagenesis and cancer. However, precise spectroscopy data, in particular in their electronic excited states are scarce if not missing. We here report an original way to produce isomer-selected radical cations of DNA bases, exemplified in the case of cytosine, through the photodissociation of cold cytosine-silver (C-Ag) complex.

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The infrared (IR) spectra of alkali and alkaline earth metal ion complexes with the Ac-Tyr-NHMe (GYG) peptide have been measured by laser photodissociation in a cold ion trap coupled with an electrospray mass spectrometer. The GYG peptide corresponds to a portion of the ion selectivity filter in the KcsA K channel that allows K to pass, but blocks Na even though it has a smaller ionic radius than K . This current study extends a previous investigation on Na and K to the entire set of alkali metaI ions and alkaline earth dications.

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Can the Partial Peptide SIVSF of the β-Adrenergic Receptor Recognize Chirality of the Epinephrine Neurotransmitter?

J Phys Chem Lett

May 2019

Laboratory for Chemistry and Life Science, Institute of Innovative Research , Tokyo Institute of Technology, 4259 Nagatsuta-cho, Midori-ku , Yokohama , 226-8503 , Japan.

Chirality plays an essential role in biological molecular recognition, such as neurotransmission. Here, we applied electrospray-cold ion trap spectroscopy to complexes of a partial binding motif SIVSF of a β-adrenergic receptor pocket with L- and D-epinephrine AdH. The ultraviolet spectrum of the SIVSF-AdH complex changed drastically when L-AdH was replaced by its enantiomer.

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