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sp. nov., a novel symbiotic bacterial species associated with entomopathogenic nematodes. | LitMetric

sp. nov., a novel symbiotic bacterial species associated with entomopathogenic nematodes.

Int J Syst Evol Microbiol

Departamento de Sanidad Vegetal, Facultad de Ciencias Agronómicas, Universidad de Chile, P.O. Box 1004, Santiago, Chile.

Published: October 2022

AI Article Synopsis

  • * DNA-DNA hybridization shows strain UCH-936 shares only 50.5% similarity with its closest relative, DSM 23513, which is below the threshold needed to classify them as the same species.
  • * Genomic analysis reveals unique features, including specific virulence genes, confirming UCH-936's distinct taxonomic status and leading to the proposal of it as a new species, sp. nov., with type strain UCH-936.

Article Abstract

One motile, Gram-negative, non-spore-forming and rod-shaped symbiotic bacterium, strain UCH-936, was isolated from nematodes. Results of biochemical, physiological, molecular and genomic analyses suggest that it represents a new species, which we propose to name sp. nov. Digital DNA-DNA hybridization shows that strain UCH-936 is more closely related to DSM 23513, but shares solely 50.5 % similarity, which is below the 70% cut-off value that delimits species boundaries in bacteria. Phylogenetic reconstructions using whole-genome sequences show that strain UCH-936 forms a unique clade, suggesting its novel and distinct taxonomic status again. Similarly, comparative genomic analyses shows that the virulence factor flagella-related gene , the type IV pili-related gene and the vibriobactin-related gene are present in the genome of strain UCH-936 but absent in the genomes of its closest relatives. Biochemically and physiologically, UCH-936 differs also from all closely related species. Therefore, sp. nov. is proposed as a new species with the type strain UCH-936 (CCCT 21.06=CCM 9188=CCOS 1991).

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Source
http://dx.doi.org/10.1099/ijsem.0.005525DOI Listing

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